KEGG   Puccinia graminis: PGTG_08185
Entry
PGTG_08185        CDS       T02226                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
pgr  Puccinia graminis
Pathway
pgr03013  Nucleocytoplasmic transport
pgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PGTG_08185
  09122 Translation
   03013 Nucleocytoplasmic transport
    PGTG_08185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgr03019]
    PGTG_08185
   03041 Spliceosome [BR:pgr03041]
    PGTG_08185
Messenger RNA biogenesis [BR:pgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     PGTG_08185
Spliceosome [BR:pgr03041]
 Complex C
  Other components
   EJC/TREX
    PGTG_08185
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PGTG_08185
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_1st ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_Aladin RMC1_N Beta-prop_NOL10_N DSE1_N Beta-prop_IFT140_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st NBCH_WD40 eIF2A CFAP251_N Beta-prop_WDR75_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_RSE1_2nd Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_TEP1_C ASA1 Nucleoporin_N Beta-prop_WDR11_1st Cytochrom_D1 Beta-prop_RSE1_1st Lactonase TRM82_WD MIOS_WD40
Other DBs
NCBI-GeneID: 10534136
NCBI-ProteinID: XP_003326355
UniProt: E3KCI8
LinkDB
AA seq 322 aa
MALKPPATRLLTGHTGPVFTLGWSVDGRKLASGSKDEGIRIWNPERADYGKASAELKGHS
SRINQLRWDPTHPERLASAGEDGTLRFWDIRQGSKPIRTVENDSKLSFLNLCWSPDASIV
AIGDSKDRLQFYDSSTGKKLAEHVEFSRSPNASEGQKDQINEVSFSHSGDYLFVPTGAGS
VVTYAFSREGDAAKLTEFHRYEAHACVINCIDIDPRGRYIAVGGADSIVSLIDLEEFYCV
NTFAHLESDVRTISFSYDGDFIAVAGKDFFIDVSAVSTGQQVRKIDNLTYPVNSIAWHPS
KYVLAYAGDEKAGNVRVANLAS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcactcaaaccacccgccactcgactgctcaccgggcataccgggcccgtcttcacc
ctggggtggtcggtcgatggaaggaaactagcgagcggatcgaaggacgaagggatacga
atctggaatcccgaacgagctgattatggcaaggcatccgccgaattgaaaggacattcc
agtcggatcaatcaattacgatgggatcctactcatcctgaaagactagccagcgcggga
gaggatggcacactgcgtttctgggacatccgacagggatccaagccgatacggacggtc
gaaaacgactcgaagctctcattcctgaatctctgttggtcaccagatgcgtcgatcgtc
gcgatcggagactccaaggatcgcctccaattttacgactcatcgaccggcaaaaaactt
gcagaacatgtcgagttttctagaagtcctaacgccagtgagggacaaaaagatcaaata
aacgaggtctccttctctcactcgggcgactatctcttcgtgcccaccggggctggctct
gtggttacctacgcgttttctagagaaggtgacgcggccaagttaaccgaatttcaccga
tacgaagctcatgcttgtgtcatcaactgcatcgatatcgaccctagaggacgatacatc
gcagtaggtggggcagattcgatagtcagtctgatcgacctggaggaattttattgtgtc
aacacctttgcccatcttgaatcggatgtccggacgatcagtttctcatatgatggcgac
ttcattgccgttgcaggaaaagacttcttcatcgatgtctcggcggtatcaaccggccaa
caggtccggaaaatcgacaacttgacctaccctgtcaatagcatcgcctggcatccgtcc
aagtacgtcttggcctacgccggcgacgagaaggccggcaacgttcgggtggccaatctg
gcctcttga

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