KEGG   Puccinia graminis: PGTG_08191
Entry
PGTG_08191        CDS       T02226                                 
Name
(RefSeq) ATP-dependent RNA helicase uap56
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
pgr  Puccinia graminis
Pathway
pgr03013  Nucleocytoplasmic transport
pgr03015  mRNA surveillance pathway
pgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PGTG_08191
  09122 Translation
   03013 Nucleocytoplasmic transport
    PGTG_08191
   03015 mRNA surveillance pathway
    PGTG_08191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgr03019]
    PGTG_08191
   03041 Spliceosome [BR:pgr03041]
    PGTG_08191
Enzymes [BR:pgr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PGTG_08191
Messenger RNA biogenesis [BR:pgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PGTG_08191
Spliceosome [BR:pgr03041]
 Complex C
  Other components
   EJC/TREX
    PGTG_08191
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PGTG_08191
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 CMS1
Other DBs
NCBI-GeneID: 10534142
NCBI-ProteinID: XP_003326361
UniProt: E3KCJ4
LinkDB
AA seq 433 aa
MAEHAEDLIDYDEDDAGVAPSAAVTSTTNGAAAPLNGKDQKGSYVGIHSTGFRDFLLKPE
LLRAISDLGFEHPSEVQQECIPQAILGMDVLCQAKSGMGKTAVFVTATLQQMDPKEGEVS
MLVLCHTRELAYQIKNEYARFSKYMPDIRTAVVYGGIPIKQDAEMLKAKDKCPHILVGTP
GRLNALVRDGLLKCNTVRTFVLDECDKMLESVDMRRDVQQVFLATPHAKQVMMFSATLSK
EIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQHFVKIDEAAKNRKLNDLLDTLEFNQVCIF
VKSVSRAVQLDQLLRDCNFPSIAIHSGLGQEERIDRYKQFKAFEKRILVATDIFGRGIDV
ERVNIVINYDTPGEADSYLHRVGRAGRFGTKGLAITFVSSEADQTVLDAIQSRFEVAITE
LPDHIEASSYMNA
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggccgaacacgcagaagatctcattgactacgacgaggacgatgccggcgtcgccccc
tctgctgccgtcacatccaccactaatggcgctgccgccccgctaaatggaaaagaccag
aagggctcctacgtcggtatccattccaccgggttccgcgatttcttgttgaaacccgag
ctattgagagcgatcagtgatctcggtttcgaacacccttccgaagtccaacaggaatgt
attccgcaagcgattctagggatggatgtattatgtcaagccaagtcaggaatgggtaag
actgcggtatttgtgacagcgacgctgcaacagatggacccgaaggaaggcgaggtgtcg
atgttggtgctatgtcatacgcgtgaattggcctatcagatcaagaacgagtacgcccgg
ttcagcaagtacatgcccgacatcaggacggcggtggtctatggtgggatcccgatcaaa
caggatgccgagatgctcaaggccaaggacaaatgtccccatatcctcgtcggcacgcct
ggccgtttgaacgccctcgtacgcgacggcttgttgaagtgcaacaccgtcagaactttc
gtcctcgatgaatgtgataagatgcttgaatccgtcgatatgcgtcgggacgttcaacaa
gtcttcttggccactccccatgccaaacaagtgatgatgttcagtgctacattgagcaaa
gagatccgcccggtctgtaaaaagttcatgcagaacccgctggagatatatgttgatgat
gaggccaaactgaccctccatgggcttcaacaacacttcgtcaagatcgacgaagctgcc
aagaaccgcaaactgaacgatttattagacactcttgagttcaaccaagtttgcatcttt
gtcaagtcggtctccagggccgtccaactcgatcagctcttgcgtgattgtaactttccc
tcgattgccattcattctggattgggccaagaagaacgtatcgatcggtacaaacagttc
aaggcattcgagaaacgaatcttggttgcgacggatatcttcggacgtgggatcgatgtc
gaacgagtgaatatcgtgatcaattacgatactcctggagaggctgattcctatctccat
cgagtaggacgggccggtcggttcgggacgaagggattggcaatcacgtttgtctcgagc
gaggctgaccaaacggtcttggacgctatccaatcgagattcgaggtggcaatcaccgag
ctacctgatcacatcgaggctagctcctacatgaatgcttga

DBGET integrated database retrieval system