Puccinia graminis: PGTG_08418
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Entry
PGTG_08418 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
pgr
Puccinia graminis
Pathway
pgr03030
DNA replication
pgr03420
Nucleotide excision repair
pgr03430
Mismatch repair
pgr03440
Homologous recombination
pgr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGTG_08418
03420 Nucleotide excision repair
PGTG_08418
03430 Mismatch repair
PGTG_08418
03440 Homologous recombination
PGTG_08418
03460 Fanconi anemia pathway
PGTG_08418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgr03000
]
PGTG_08418
03032 DNA replication proteins [BR:
pgr03032
]
PGTG_08418
03400 DNA repair and recombination proteins [BR:
pgr03400
]
PGTG_08418
Transcription factors [BR:
pgr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PGTG_08418
DNA replication proteins [BR:
pgr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PGTG_08418
DNA repair and recombination proteins [BR:
pgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PGTG_08418
MMR (mismatch excision repair)
PGTG_08418
DSBR (double strand breaks repair)
HR (homologous recombination)
PGTG_08418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
POT1
GA
MJ1010-like_2nd
Mrr_cat_2
Motif
Other DBs
NCBI-GeneID:
10529841
NCBI-ProteinID:
XP_003326881
UniProt:
E3KDM6
LinkDB
All DBs
AA seq
618 aa
AA seq
DB search
MAAQLTHNAIKRMFEDQNLEIENLTVQVISIKSVGVSNVSSAPERWRIIISDGQMFITAM
LATQLNHFVQENQIKKHSILRVPSYTVNVIGSRHVVVLLGVEVVQSDYPERIGNPVNCDA
EANANKDNSNTKPAPAVLANRSNVAPPKPDVKPDIDVKPKPSSYKPNIPASKPNKPGVRR
TGNHIPIAGVSPFANNWKIKARVSQKTEIKRWSNSRGDGKLFSVTFLDDSGQIRATGFND
AVDNLYDSLQEGQVYLISRGKITIAKKPYNTTGHDYEIVFENTTEVEECGDSADTPKIIL
NKLTKLSELNDVEKDAVIDVVAVLKDVGEISEIVSKATQKTIVKRDITLIDQSAYSIRMT
LWGKTAETFEAPTESIVAFQGVKVGDFGGRNLSMISSSVMLVNPDIPEAFDLKGWYDNEG
VNAKIQSFANTGTGIGREITEDSLKTVAEIKDTQLGMNERGDYFNFRATIMYIKSETISY
PACPTERCNKKLLRDGDDEWRCEKCDKLFPAPDHRYLIQMTVQDHTGTLWLSGFNEVGQI
ILPMNANELIGIKETDEAQYQKIVTDATAKTYTMVCRAKEETYNDVNRTKYSVLRIAPVD
WVAAGLQLAETLLKNYSA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacaacttactcacaatgcgatcaaaaggatgttcgaagaccaaaacttggag
atcgaaaatctgactgtccaagtgatcagtatcaagtcagtcggagtatccaacgtgtct
tcagcacctgaaagatggaggataattatctcggatggacagatgtttataacggcgatg
ttagcgacccaactgaaccactttgtgcaagagaaccagatcaagaagcattcgatcctg
cgagttccgtcctacacggtcaatgtgattggctcgcggcacgtggtagtcttactggga
gtcgaggtggtccaatcggactacccggagcgcatcggcaatcccgtcaattgcgacgcc
gaggccaacgccaacaaggacaattcgaacaccaagcccgcccccgccgtcttggccaac
cgatccaatgtcgcccctcctaagcctgatgtcaagcctgacatcgacgtcaagcccaaa
ccctcctcctataaacctaacatccccgcctctaaacctaacaaacctggcgtccgtcgt
actggtaatcacattcctattgcgggagtcagtccatttgctaacaactggaaaatcaaa
gccagagtctcccaaaaaacggaaatcaaaagatggtcgaattcacgaggagatgggaag
ctattttcggtgaccttcttagatgacagtggacaaatcagagcgactggcttcaacgat
gcggtagataacttatacgactctctgcaagaaggccaagtttatttgatctctcgaggg
aagatcactattgctaagaaaccgtataatacgaccggccatgattatgagatcgttttc
gaaaacactaccgaagtcgaagaatgtggagatagcgctgacacgcctaagatcatctta
aacaaattgactaaattgagtgaactgaacgatgtcgagaaagatgcggttatcgatgtc
gtagccgtcttgaaagatgttggtgagatctcggagatagtgagcaaggcgactcaaaag
acgatagtgaagcgagacatcacgttaatcgatcaatcggcgtattcgattcgaatgacg
ttatgggggaagacggcggagacctttgaggcgccgacggagtcgattgtggccttccaa
ggggtcaaggtgggagactttgggggccggaatctgagcatgatatcgagctcggtgatg
ctcgtgaacccggacatcccggaggcctttgatctgaaaggatggtacgacaacgaaggc
gtgaatgcgaagatccagagtttcgctaacaccggcaccggcatcggccgcgagatcacc
gaggactcgctcaagactgtcgctgaaattaaggacactcagctcggaatgaacgagcgt
ggcgactatttcaacttccgggccactattatgtatatcaagagtgagacgatcagctat
cctgcctgtccgaccgaacgttgtaataagaaactcttgcgcgatggagacgatgaatgg
agatgtgagaagtgtgataaactcttcccagcacctgaccatcgatacttgatccagatg
acagtccaagatcatacgggaacgctctggctctcaggcttcaacgaagtcggccagatc
atcttaccgatgaatgccaacgagcttatcgggatcaaggagaccgacgaggcccaatac
caaaagatcgtcaccgacgccactgccaagacttacaccatggtctgtcgcgctaaggag
gaaacttataacgacgtcaatcggactaagtattccgtccttcgcatcgcccccgtcgat
tgggtcgccgccggcctccaattggccgaaactttactcaagaattattccgcttga
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integrated database retrieval system
