Puccinia graminis: PGTG_09562
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Entry
PGTG_09562 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
pgr
Puccinia graminis
Pathway
pgr04111
Cell cycle - yeast
pgr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PGTG_09562
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PGTG_09562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgr04121
]
PGTG_09562
Ubiquitin system [BR:
pgr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PGTG_09562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_SCAP
F-box-like
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR75_1st
F-box
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_Vps41
F-box_4
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
10532537
NCBI-ProteinID:
XP_003328268
UniProt:
E3KHS4
LinkDB
All DBs
AA seq
624 aa
AA seq
DB search
MVQQDFLLKPNPFEFPKQQEQETSTINLEPTATSSYNVNAFGVIDRPSTIPRLAVSNGLP
GGGDCAKLCPRHQRMANEGTNRALQEAIEKLPQTDQEAINTAWSIFSASNVHRRTLILTG
LLTICCPSQLTFLTDSLRSACRTDPFSRLPKELSLRILSYFDAFSLGRAAQVSKLWKKLA
DDDLLWREMCQQHIERTCQKCGWGLPSMQKRKRSPSLPSSQQLRSDKRAKSSDELLNEPS
STPSPSTLPPPLPPPPPPPPLPPPIASSSSSLLPPILLPSSSHQQLLSIPTGPSSPTSTG
EDSTKPWKSVYTERLALERNWRKGSYVERVLTGHTDSITCLQFEENFESPSFPILMTGSW
DRTIRIWNLDKLECIQTLNGHTRGIKCLQFDTNKLISGGMDHCLKLWNWRTGECIRTIQG
HQAPVSCLNFDNEVLASGSADSTIRIWNFNTGAGYVLRGHQEWVNTVALDTKPYPSNNSS
RTLKLLYSGSDDGQIRIWNLGSRETLKILIGHVAQVQSLSLRPSSILLNDSLISGSLDNC
IKLWNIKISFDLPPSASSNHSRFNHHPLGNGDDDDQGDYDDDRVVVSVDGFCERTLFGHI
QGVWSIDADKLRIVSASHDRSLKI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcaagacttcctactcaaaccaaacccattcgaattcccaaaacaacaggaa
caagaaacatcaaccatcaacctcgaacctacagccacctcatcctacaacgtcaacgca
ttcggagtgatcgacagaccatccaccataccacgactagccgtctcaaatggactgcca
ggaggaggagactgtgcgaaactgtgtccacgacatcagcggatggccaacgaaggaacc
aatcgagcactgcaggaagccatcgagaaactaccacagacagaccaagaggccatcaac
accgcctggagcatcttcagtgcctccaacgtccatcgacgaacattgatcctcaccggc
ctcttgacgatctgctgtccatcccaactgaccttcctgacggactccttgcgctcggct
tgtcggacagaccccttcagtcggctgcccaaagaactcagcctccggatcctgtcctac
ttcgacgccttctccctcggaagggccgcccaagtcagcaagctgtggaagaaactcgcc
gacgacgacctgctctggcgcgagatgtgccagcaacatatcgaacgcacctgccagaaa
tgcggctggggtctcccctcgatgcagaaacgtaaacgctctccctctctgcctagttct
cagcagcttcgatccgacaaacgggccaagtcctccgacgagcttctcaacgaaccctcc
tcgacaccatccccatccacgctccctcctcctctaccaccaccacctcctcctcctcca
cttcctcccccaatagcatcatcatcctcttctttactcccaccgatcctattacccagc
tcatcccaccaacaactactctcgatccccaccggtccctcatcacccacctcgactgga
gaagattcaaccaaaccatggaaatcggtgtacaccgaacgattagcattagaacgtaat
tggaggaaggggagttatgtggagagagtcttaacgggccatacagactcgatcacctgt
cttcagttcgaagagaacttcgagtcgccaagtttcccgatcctgatgactgggagttgg
gaccggacgatccggatctggaacctggataagctggaatgtatccagaccttgaacggc
cacactcgggggatcaagtgtctgcaattcgacaccaacaagttgatctcgggagggatg
gaccattgcttgaagctatggaactggcggacgggcgaatgcatccggaccatccagggc
catcaagcccccgtgagctgtctgaacttcgacaacgaagtcctcgcttctggctcagct
gactcgaccatccggatctggaacttcaacaccggcgccggctatgtgctccgaggccat
caggaatgggtcaacaccgtcgccttggacaccaaaccatatccttctaacaactcttcc
cgcaccctcaagttgctctattcgggctccgatgatggccagatccggatctggaacctc
ggctcacgagagaccctgaagatcttgatcggccatgtcgctcaagtccaatccctctcc
ttgcgtccctcttcaatcctgctcaatgattcgcttatctccggctctctcgacaattgt
atcaaactctggaacatcaaaatctccttcgatcttcctccttctgcctcctctaatcat
tctcgtttcaatcatcaccctcttggaaatggtgatgatgatgatcagggtgattatgat
gatgatcgagtggtggtgagtgtggatgggttttgtgaacggacgttgtttggtcatatc
caaggagtctggagtatcgatgcagataaactaaggatcgtcagtgcttcgcatgataga
tcgttgaagatttag
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integrated database retrieval system