Puccinia graminis: PGTG_10627
Help
Entry
PGTG_10627 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pgr
Puccinia graminis
Pathway
pgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGTG_10627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_10627
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_10627
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PGTG_10627
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PGTG_10627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
10545510
NCBI-ProteinID:
XP_003328668
UniProt:
E3KIX4
LinkDB
All DBs
AA seq
785 aa
AA seq
DB search
MQGLPAPPPSIGYDVNEFRRFFKFGLDQLQYNNKYIINDLTTLASVYHHRMSTYIVKDIE
QHIRNSHPSHRLIGFYVLDSICKNLGHPFPQLFKPFIERLFLIAYRDIEDVDPITKVKFE
ELLGTWRTGSANQTELFDPDIQRRIEESVFGNWRRDDSNASQAFLSGIKQQPAVATPAEK
ASILFDVRRILSERDQVAAAYPADESNLAQIATLQQLEQLIATQQLTISQVDDIRKQLQP
LKASLLPPAPVECGILPSHLPAIVPQMAPLPTLPPLHHSIQPYGDSDSLASLTRLLDTNP
NILLQAVNQSTHPISQHQTSFNFDPNLQLGFNHPEQHSQSAVVSSAPQLAQEQSNTNMFD
SQQLAAALAYLNPAAHNGLLPNPGAQDRPIEITQQPSPAPSTLSTSESLPASHTDPTIVE
YENMIASLPIELQNSSINRVKAADIADILYSHIPQFCRQDGSRFLYGKIGSQRASEQLDR
HFRLQRRVHESGQRAQQRMWSQLQSEWIDSHDFGIAGHGENSKAEGSQSKKRKSIDEEKS
ETELSKKSIVRPSSPGLASQPCPICQESFETRFDEDEAEFYWTNAVELTKEAGKRVVYHA
TCHYETIRNKARMKIKSELEENRLKKRIQLDAERKSRSENGSREQANGAGGVEPLTELGS
SCNNDNQAVDSTTGDGETCLLQLDEAFFGGESESTKIKLESSDPIPPTSTSSELIVAHLP
NDDPQVKLEANLPLVIPPPSKASPRLLGKRKSSPIELLDPLSDLPDHSVHLPSEVTSKKS
KLSST
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcttgcctgccccaccaccctcgattggctatgatgtcaacgagtttcgaagg
ttcttcaaattcggcctcgaccaactccagtataacaataagtacatcatcaacgatctc
accaccctggccagtgtctaccaccatcggatgtctacctacatcgtcaaggatatcgaa
caacacattcgaaacagccatccgtcgcacagattgattggattttacgtcttggattca
atttgcaagaacttgggtcatccgtttcctcagttattcaaaccattcattgaacgattg
tttttaattgcttaccgggatattgaagacgtcgatccaatcaccaaggtcaaattcgag
gaacttctaggaacctggagaactggatcagccaaccaaaccgagctcttcgatccggac
atccagagaaggatagaagaaagcgtctttggtaactggcgacgggacgattctaatgcc
agccaagctttcctgagtgggataaaacaacaaccagcagttgccactcctgccgaaaag
gctagcattttatttgatgtgcgaaggatcttatcggaacgcgaccaggttgccgcagct
tatccagccgatgaatctaacctggctcaaattgccactctccaacaactcgaacaatta
atcgcgacccagcaacttacaatcagtcaggttgatgacatccgaaaacagctccagcct
ctcaaagccagcctcctcccgcccgccccagttgagtgtggtattctaccgtcacattta
ccggcaattgtacctcagatggctcctttacctacccttcctcctcttcatcattcaatt
caaccctatggagactctgattcacttgctagtcttactagactcctagacaccaatcca
aatatccttctccaggcagtcaatcaatcaactcatcctatttctcagcatcaaacctcc
ttcaactttgatccaaatctgcaactgggttttaaccatccagaacagcattcacagtcc
gctgttgtctcctccgctcctcagcttgcgcaagaacaatcaaatacaaatatgttcgac
agccagcaactagctgccgcgcttgcttatctgaatccggcagctcacaatggtttgtta
cccaacccaggtgctcaagaccgaccgatcgagattactcagcaacctagccccgcgccc
tccacgcttagcactagcgaaagtctcccggcctcgcacacggatccgaccatagttgaa
tacgaaaatatgatcgccagtttaccgatagaacttcaaaactcatccatcaatcgcgtc
aaagcagcagacattgctgacatcctttattcacacattcctcagttctgtcgccaggat
ggcagtcgcttcttgtatggaaagattgggagtcagcgggcatcagagcaacttgatcga
cactttcgacttcagaggcgagtgcatgagtcgggacaacgtgcacaacagaggatgtgg
tcccaattacaatccgaatggatcgactctcacgactttgggatcgccggccatggggag
aactcgaaggccgagggaagtcagagcaagaagaggaaatcgatagacgaagaaaaatcg
gagaccgagctttcgaagaagtcaatcgttcgacccagctcgcccggcctggctagtcaa
ccctgtccgatctgccaagagtcattcgagactcggttcgatgaggatgaggcggaattc
tactggacgaatgcggtcgagttgacgaaggaggccggcaagcgagtggtctatcacgcg
acttgtcattacgagacgattcggaacaaggcccggatgaagatcaagtcagaactggag
gagaaccggctcaagaagaggattcaattggacgccgagcggaagagtcggagtgagaat
ggaagcagagagcaagctaatggagctggaggagttgagccgctgactgagcttggtagt
agttgtaataatgataatcaagcagtcgactctacgactggtgatggagagacatgttta
cttcagcttgatgaagcattctttggcggagagagtgagagcactaagatcaaacttgag
tcttctgatccgattcctcctactagtacttcctcagagttaatcgtagcccatcttcct
aatgatgatccacaagtaaaacttgaagccaacctcccgcttgtaatccctcctcctagt
aaggcctctcctcgtttgctcggcaaacgcaaatcctctcccattgagcttcttgatcct
ctctctgatctgcctgatcactctgttcatctaccctctgaggtgacgagtaagaagtcc
aaactgagttcaacttga
DBGET
integrated database retrieval system
