Puccinia graminis: PGTG_12289
Help
Entry
PGTG_12289 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_12289
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PGTG_12289
microRNA pathway
RISC loading complex
PGTG_12289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
DEAD
ResIII
Helicase_C
dsrm
SLFN-g3_helicase
SNF2-rel_dom
AAA_22
nSTAND3
CT_C_D
Motif
Other DBs
NCBI-GeneID:
10540346
NCBI-ProteinID:
XP_003330752
UniProt:
E3KPU8
LinkDB
All DBs
AA seq
1403 aa
AA seq
DB search
MGDNDDHPRSVDAEDSSVDVKESLKIPRLYQAELLEEAKKRNIIIRADTGTGKTLVALHL
IVWTAAQTESAPNGHQIQAFLVPTRPLVHQQAEYIQSQSTLRVKAYAGDLPADLWNVDKW
RSGLKEVDVIVSTAQIFHDLISKGFWKFEDISLLIFDEAHHCRKDHVYNQIMRSHYHRLA
KDPAQRLPKILGLTASPIWNYKDLERAEKDIKDLQCSLAAQICEVKRHTEDVSQHNFKPN
ERAVYFDPSPAFQKLSHPPWEQINDLLTKHASLKLITTFESVFLELGNYAYSLSILDWLK
SLLVVGGPNQLMSGRLLDPNHQQKVKQVTNQLEELLSINDIPENQLSSKVIALNKLLVKY
KEEDGRDDFLCIVFVERRQHTQLLFALLERNTQLKGFIRPGALAGHGGGNENDLLGIKMD
SRAQNKTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDQITTWKGYIQSRGRARARN
SDYIVMLPTDSSSKYLAFSGKEDELKAALYDRPDNELIGGGAVEPTPQLICRLADGNDSI
LTYGSAPGLLNDVCQLIPQDEFLPVLAPEYEIMCLGESFKSQVTLPPMAALPSSQRTFMG
LEMSTKKEAKRSAAFEACKVLRELGVLNEHFLPHREDKTGQARDADDQVQAIIPNVYGDF
RTSQEVWLHEISFPDESPAGFSTMGFLCAQHVDISEGLHLYDHYQDSRTLPVKIKRSRRM
TWAQDDLSINLQRLETFTRLVIQVAVNRKSYEGRLLFLVAPLLNDTCEIDWNLVETPLIP
LSNHADSLRYQCTIVPIPHLHCRIFDTCEPSGDLSFASKPHHVPAGQHMGDFCKKISKFR
NLGHFYAVVYNLKPEQFKGKLVYLQSTFEVLDNLSKSESLLTQPYRLLLPLKLCQGSRIP
RSLWKVFSYLPSLTRLLHDALQAKFLFKRLDFPAISLPHGIHALTPPGVGVPWDYQTLET
VGDAFLKLATSVHVYISHLRKGEGDMSHVRARSIDNAYLRRKAVQANLPGSILSQRFRTG
KFRDAQTEEGKELANGNFSRKIPRRVLSDVVEALLGAGLLTGGIELGLKVGTALDLCFGG
ISPWSQRTLTISFGKDAHDKLDPSMLLTCEQIERKINYVFKEKLFLVQALTHRSANSFLT
NCYEREEWLGDAVIDMWIVEHAYKRFDNATADELSLARAKVACNGSLGFLAIKKLGLHEF
IMHKSDNFHQACAEAIEAIEPFTKISEFFSNINNLFVVFDPPKILNDALEAIVGAVFVDS
GLNLPTAYRVLDVIFEDVTPSLSRLAARDPVSTLLRLRDRYQCTELLRTTTTINEPNPEG
EEKTPVSVRVCRIEFHGQQIGIGRHQSSTSVAEQRASLEAIKVLQESLPSSESATPDSLW
SKCRCMALITTAKAATPSSTKKK
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataatgatgatcaccctcgctcggttgatgccgaggatagctcggttgatgtg
aaggaatcgttgaagataccgcgactctatcaggccgagcttttggaggaagccaagaag
cgcaacatcatcatccgggccgacaccgggaccggcaagactctcgtggcccttcacctg
atcgtctggacggccgcccagacggaatcagccccgaatggccatcagatccaggccttc
ctcgtccctactcgtccgctcgttcaccaacaggccgagtacatccagagccaatccacc
ctccgcgtcaaagcctacgctggcgaccttccagcagacttatggaacgtcgacaaatgg
cgctcgggattgaaggaggtcgacgtcatcgtctcaactgcccagattttccacgatttg
atctcgaaaggattttggaaatttgaggatatatctcttttgatcttcgatgaggcgcat
cattgtcgtaaagaccacgtgtataatcaaataatgcggagtcattatcatcgtctggcc
aaagatcctgcacagcgtctacctaaaattctaggattgacagcgtcgccgatctggaat
tataaggatttggaaagggcagaaaaagatatcaaagatcttcaatgctctcttgcagct
caaatttgtgaggtcaagagacacaccgaagatgtttcccagcacaactttaagcccaac
gaacgggctgtatacttcgacccctctcctgcttttcaaaagctctcacatcctccctgg
gagcagattaacgatctactcaccaagcatgccagcctcaagctgatcaccacttttgaa
tcggtctttttggagttaggaaattacgcgtactctttatccatccttgactggctcaaa
tccctcttggtcgtcggcggccccaaccaactgatgtccgggcgtctgttggatccaaat
caccaacaaaaagttaaacaagttactaatcaacttgaagagcttttgagcatcaatgat
attcctgaaaatcaactttcgtccaaggtaatcgctttgaacaagctcctggtcaaatac
aaagaggaggatggccgcgacgactttctctgtattgtgtttgtcgagcgccgacaacac
acccaactgctgttcgctctgttggagcgcaatacccaactgaaaggttttatccgtcct
ggagccttggccggacacggtgggggcaacgagaatgacctgcttggaatcaaaatggac
tcaagagcgcaaaacaagactgttgcaaaatttaggacgggtgaacataatctaactatt
gcaaccagtgtggccgaggaaggtctggacttccgctcttgcagagttgtcattcgattc
gatcaaatcaccacctggaaagggtacattcaatctcgtggtcgggctcgagcgcgcaat
tccgactatatcgtcatgcttccaactgactcctcgagtaaatatttggcgtttagtggg
aaagaggatgaactcaaagccgcactctatgaccgtcccgataatgagctcattggaggt
ggcgcagttgaaccgactcctcaattaatttgccgacttgccgatggaaatgattcgatc
ttgacttacggttccgcccctggtcttttgaatgacgtctgtcaactgattccgcaagat
gaatttcttccggtccttgcgccagagtatgagatcatgtgtttaggggaaagtttcaaa
tctcaagttacgcttccccccatggcagctctcccttcttctcagcgtacttttatggga
ctcgagatgtcgacgaaaaaggaggccaaacgttccgctgccttcgaagcctgcaaagtc
ttacgagagctgggtgtactcaacgaacatttcttaccccatagagaagataagaccggt
caggctcgtgacgcggatgatcaggtccaagccatcattccaaacgtttacggtgatttt
cggacctcacaagaagtctggctccacgaaatatctttcccggatgaaagtcccgcggga
ttctctacgatgggtttcctatgtgctcaacatgtagacatttcggagggcttgcactta
tatgatcactaccaagatagcagaactctgcccgtcaagatcaaacggagtcgcaggatg
acatgggctcaggatgatttatcgatcaacctgcaaagattggagacctttactcgattg
gttatccaagttgccgtaaaccgcaagtcgtacgaaggaagactgttattccttgttgct
cctcttctcaacgatacatgcgagatcgattggaatctggtggaaactccgctgattcca
ctttccaaccacgcagacagcttacgttaccaatgtacaatcgtcccgattccccacctc
cattgcagaatattcgacacctgcgaaccgtctggtgacctgtcttttgcctccaagcct
catcacgttcctgctggtcaacacatgggtgacttttgtaaaaagatatcgaaattccgc
aacctcggtcacttttatgcagtcgtttacaatctgaagccagaacagttcaaggggaaa
ttagtttatctccaaagtacctttgaggtcttggataatttgtcaaagtccgaatcattg
ttgacacagccttaccgtctcttgttaccattaaagctctgccaaggatcacgcatccct
cgatcgctttggaaagtatttagctacttgccatccttgactcgcctcttgcatgatgca
ctccaagcaaaatttctcttcaaacgactagatttccccgcaatctcacttccccatgga
attcatgcactcacgccgcctggtgtcggagttccttgggactatcaaactcttgagacc
gttggagatgcatttctcaagttggccacatcggttcacgtgtatatcagtcatctcagg
aagggtgaaggtgacatgagtcatgtacgagccaggtcgatcgacaacgcctacttgcga
aggaaagctgttcaggctaatctgcccggctctatcctcagccaacgcttccgcacaggc
aaattcagagacgctcaaacggaagaaggcaaagagttggccaacggtaatttctcgaga
aagatccctaggcgcgttttgtccgatgtcgttgaggctctcctgggcgctgggttgctt
actggaggtattgaacttgggctgaaagttggaacggctctcgatctttgctttgggggc
atttcaccctggagccaacgcacgctaactatcagtttcggaaaggatgcccatgataag
cttgatccatcaatgcttctcacatgcgaacagatcgagcgaaagatcaactacgtgttc
aaagagaaattattcctcgtccaagctttaactcaccgtagtgcgaactcattcttgact
aactgttacgagagggaggagtggctaggagatgcagtgatcgacatgtggatcgtcgag
cacgcctacaagcgcttcgataacgccaccgcagatgaactgagtctcgcccgagcaaag
gtggcttgcaatggtagtctaggtttcttggcgatcaaaaaactaggtctacatgagttc
atcatgcacaagtctgacaatttccatcaggcgtgcgcggaggcgatagaagccatcgag
ccatttacgaagatctcggagtttttttcaaatatcaataacctctttgtggtcttcgat
ccgcctaagatcttgaatgatgccttggaagctatcgtcggcgcggtgttcgttgatagc
ggcttgaacctaccaaccgcatatcgagtcctggatgtcatatttgaggatgtaacccca
agcttatctcgactagctgctcgggatcctgtgtcgacactattgagactccgtgatcgg
tatcaatgcaccgaactgctcagaacaacaactaccatcaacgagcccaatcccgaagga
gaggagaaaacgccggtctcggtcagggtctgtcgcatcgaattccatggccaacagatc
ggaattggccgacaccagagctcgacaagcgtagccgaacagagagcttcactggaagcg
atcaaagtcttgcaggaaagtctcccatcatccgaaagcgctactccagattctttgtgg
tccaaatgtcgatgcatggcgttgatcaccaccgcaaaagcggcgacgcccagctcgact
aaaaagaagtga
DBGET
integrated database retrieval system
