Puccinia graminis: PGTG_12810
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Entry
PGTG_12810 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
pgr
Puccinia graminis
Pathway
pgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGTG_12810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_12810
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PGTG_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
WH_PARP12
Motif
Other DBs
NCBI-GeneID:
10537458
NCBI-ProteinID:
XP_003331645
UniProt:
E3KSE0
LinkDB
All DBs
AA seq
311 aa
AA seq
DB search
MSIMRSDSRTEADIRSLTMRMSILSRSDGSAQFSFGDLKALGAVTGPAEVRIRDEKPTEA
FVDVIVVPVCGLPGPPTKSLAHSIKSFFTPLILLKKYPRSLIQINLQTLSKPSDRWTNGF
TTGTLEPSATVPLFEETQSVSEKAALINAASLALLDAGVGMRGCAFAVGLAILPPSAVSP
NHNNPQALESDLIVLDPSPTEESSAKSLHLVGFHFGHGFNTTTDSGVEIGTVALCESNGS
FSYDQLQTVLKLASLATQQILAFVRQSCETVYDHEDGINSASQAAVGQPTSSNLDNSNPE
NRKKKKSKKNK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtctattatgcgctcagattcacggacggaagccgatatacgctcgttgacgatgagg
atgtcaatcttgtctcgctcggatgggtctgcacaattctcgttcggtgatctgaaggcg
ttgggcgccgtcaccgggccggctgaggttcgaatcagggacgagaaacctactgaggcc
ttcgtcgatgttatcgttgtcccggtttgtggtcttcccggacccccgaccaaatctttg
gcacattcgatcaagtcgttctttacgccgttaatactactcaagaaatatccgagatcg
ttaatccaaatcaatcttcagacgctttccaagccatctgatcgatggacgaatggcttc
acgacgggcacactagagccgagcgcgacggtgcccctattcgaggagacacagagcgtg
agcgagaaagcggcgttgatcaatgcggccagtttggccttactggatgccggagtgggc
atgagggggtgcgccttcgccgtcggattggcgatcctgcccccatccgccgtctcgccg
aatcacaacaatccgcaagctcttgaatccgatctcatcgtcctcgatcctagtcctacc
gaagaatcttccgctaagagcttacatctcgtcggtttccatttcggtcatgggttcaat
acaacaactgactcgggcgtggagattgggactgttgctctatgtgaaagcaatggtagc
tttagctacgatcagctacaaactgttctcaaattggcttcgttggctacccaacagatt
cttgcctttgtccgacagagttgcgagaccgtttatgaccacgaagatggcatcaactct
gcctcccaagctgccgtcggacaacctacttcttctaatcttgacaatagtaatccggaa
aatagaaaaaagaagaaatctaaaaagaataaatga
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