Puccinia graminis: PGTG_13612
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Entry
PGTG_13612 CDS
T02226
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_13612
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_13612
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PGTG_13612
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PGTG_13612
SLIK complex
PGTG_13612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
Chromo
CHD1-like_C
ResIII
DEAD
HDA2-3
Cdh1_DBD_1
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-GeneID:
10537952
NCBI-ProteinID:
XP_003331803
UniProt:
E3KSZ8
LinkDB
All DBs
AA seq
1824 aa
AA seq
DB search
MSLTSSLPTGKPDSTATNKQPTKTLINPHPTASASSSSPPSSSPPSSPSSPISQPPQITH
TPHSQSPSELDSDSPSSASPSSPSISSSDHDDPPKLPSRRQKPSATSSSRLELPQSYDAQ
LYGLRRSTRASQKVFEHVSLEFDDEDDGTGNDDETRPIKRSKKQSTSGKKTSAKRKAADK
SASVTPRPGIESEQDDSDFSGGGRKPGKRRRAAVIKSDGEEPSLPRISARSGKPQNYNED
DRYLGLISDSEEEQIAAYANQPTVAIGDEGDAIDVVLDHMRDTKLSDPSLNDPTQHLLYL
IKWQGYSHLHSTWESYEFAKQYRGFKKLENYIKNVWMPENLINSDPSYTDEDREAFMIER
NRTREQVESYKIVERVLMDREAPPTLDIDHDHVEYLCKWQGLNYDACTWEAEETIATIAA
EQIAIYRARIDCKTVPYHSTPLGKSRPVFDRIKEQPKYIKVGGTLKDFQVTGLNWLAYVW
HKGQNGILADEMGLGKTVQTCAFLSYLFHTMEQYGPFLIVVPLSTLPAWQMQCAQWAPDL
NVIAYIGNKVSRQTIREYEFGPPKKMKFNILLTTYEIILKDRAELAHIKWQYLAVDEAHR
LKSSESQLYEALMSFNIQSKLLITGTPLQNSVKELLALMHFLQPDKFDLSEGHFDLEDDE
KEIKIKDLHNKLQSIMLRRLKKDVVQSLPTKSERILRVEMSELQMFWYKAILTRNYAALA
SSDSQVSLLNIAMELKKASNHPFLFPGAEPMTDSKEAALRGVVVNSGKMILLDKLLTRLK
AEGHRVLIFSQMVRMLDIMSDYMSYRGYIFQRLDGTVPSEERRKAIGHFNAPGSPDFAFL
LSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKNHVNVYRLVTKDTVEED
VLERAKRKMILEYAIINQMDTSGKHVGRKEASKPETTFNKDDLSAILKFGAANLFKSSAD
QSKLESMDLDEIMNKGENFETETAPTGTSLGGEDFLQQFAVQDVKADVTSWDEIIPLSER
QRVESERTATTTKQAGEGRNRGTATSRAANGSPSSKSNVIPPEDDHGDDYEPNGPTKSGR
YKKRKLGGRFKEDTPDSIAKPKESRDSSQSRSKEFNSKEIRDLIRSIQHFGDIRQRYDTM
VKFAKLESKDREVTLKCVDELKEICERALAENEEAIRLKRQAGEEVTPAMRNKAVLIEFR
NVASINAETVMSRMNDLRLLHDELTSERDPLNWTHPASGLKSTTAGWSCEWNEAKDNSLL
IGAWRHGFGRWDLIRDDPELGLSDSIFLEEPKRVKGEEPKAKSIPSGVHLSRRGDYLLRA
LREYHEQQELEQKEQGRDGFHGHHANQSTNHHSYSATDTQHRSSRPSGKTSHSSRPAKKQ
HTQQKPPQARHHSPAVRASSKSSSELTEEADEEDEELEEEEDSMDEGECKEAMRPVKKEL
KELRADESKTIGGAARAAILKRLITAIGHHIDHCVKINRGDEKTKTRLRRHLWSFAVEWW
PRPAGSTEPLIRADKMESMFIRLRSFDPKDQKAPDASPSIPQNEAPAIQPAQESASSRTP
SSPPPPGFRRITPRSPSQDRYGREARNDPPRDSVGNGSVRYDGANGNSSRNEGWGNSSRG
PSRNDGDSRNDSGDDRRRSGGGGNSSRRVASGSGSGNNGSHRNNNTNKRRGARPPRKNPS
SNGLTSQSGYYHPIGYESGPSAPIHLDGSGPPPTVAGYINQPAAGSLYYRPPSHSPSSIH
PHPVANNRGPSYYGSPSGYPSPYPAAPPPVPSTYPNHHPFVGSPHIPDPSGFGPAAPPIP
HYPHLPQPPNPLPRPPHRPHPSHH
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgacctcatcactcccaactggaaagccagactcaaccgcaaccaacaagcaa
cccaccaagaccctcatcaaccctcaccctacagcctccgcatcatcatcctcaccccct
tcatcctcacccccatcctcaccctcatcaccgatcagccaacccccgcaaatcactcac
actccccattctcagtctccctccgaactcgactccgactcaccctcttctgcctcaccc
tcatccccatccatctcctcatccgatcacgacgatcctcccaagctaccctcccgacgc
caaaaaccatcagccacatcctccagcaggctcgaactacctcagagctatgatgctcag
ctctacggtcttcggagatctacgcgcgccagtcaaaaggtattcgagcacgtcagctta
gagttcgatgatgaggacgatgggactggtaacgatgatgaaactaggccgatcaaacgg
tccaagaaacaatccacttcaggcaagaaaacatccgccaagcgcaaagcagcagataaa
tcagccagtgtgacaccccgaccagggatcgaatcagagcaggacgatagtgatttctcg
ggaggcggccgaaagcctggcaaacgtcgtcgggcagcagtcatcaaatctgatggcgag
gaaccgtctctcccaaggatctcagctcggagtggtaagccacagaactataacgaggat
gatcgctatctgggcttgatctcagactccgaggaggaacagatcgccgcttatgccaat
caaccaacggttgcgatcggagatgagggtgacgcaattgacgtggttctggatcacatg
agagatactaaattatccgacccctcgctcaatgacccaactcaacacctgttgtatctc
atcaaatggcagggatacagtcacctccattcaacatgggaatcatacgaattcgccaaa
cagtaccgaggattcaaaaaactcgagaattatatcaagaacgtttggatgcctgaaaat
ctgatcaatagtgacccaagttatacggatgaagatcgcgaagcgtttatgattgaacga
aatcgaacccgggagcaagtcgagagctataaaatagttgaaagagtgcttatggatcgg
gaggcgccaccgacgctagacattgaccatgatcatgtcgaatatctctgcaaatggcag
ggcttaaattacgatgcatgtacttgggaagccgaagagacgatcgcgacgatcgctgca
gagcagatcgcaatttatcgggctagaattgattgtaaaaccgtcccttatcactcgacc
ccacttggtaaatctagaccggttttcgataggatcaaagagcaacccaagtatatcaaa
gtcggtggtactctgaaggacttccaggtcactggactcaactggttggcgtatgtttgg
cacaaaggtcaaaatggcatcttggctgatgagatgggcctcggaaagacagttcaaaca
tgcgcttttctatcttatctgttccacacgatggagcaatatggccccttcctgattgtc
gtaccactttcgactttacccgcatggcaaatgcaatgtgctcaatgggcaccagacttg
aatgttatcgcttatatcggtaacaaagtgagccgccaaacaatccgagaatatgagttc
gggcctccgaagaagatgaagttcaatatcctgctcactacctacgagatcatcttgaaa
gatcgcgccgagcttgctcatattaagtggcagtatttggccgttgatgaagctcatcgc
ttaaaaagtagcgaatctcagctctatgaagccctgatgtcttttaacatacaatccaag
ttgctgatcactggtactccgctccaaaatagtgtcaaagagctcttggctttaatgcac
tttttgcaaccagataaatttgatctctccgagggtcactttgatttggaagatgatgaa
aaggagataaagattaaagacttgcacaataagctacagtctatcatgcttcggagactc
aaaaaggacgtcgttcagagcttgccaactaagagtgaaaggattcttcgtgtggaaatg
tcagagttacagatgttttggtacaaggcaatcctcaccaggaattatgccgcattagcc
tccagtgattctcaagtctcactactaaatattgccatggagctgaaaaaggccagcaac
catccattcttgtttcccggcgccgagcctatgaccgattcaaaagaagcagccttgcgt
ggggtagttgttaatagtggtaagatgatcttactcgataagctgttgacgcgactcaag
gcagaaggccatcgggtcttaattttcagtcaaatggttcgaatgcttgatatcatgtca
gattatatgtcctaccgtggttatatctttcaacgattggatggaaccgtcccctctgaa
gagcgcaggaaagccattgggcatttcaacgcacctggttcccccgatttcgcctttttg
ctatccactcgtgctggtggtctcggaatcaatctcgaaactgcggataccgttataatc
tttgacagtgactggaatcctcaaaacgatctccaagcgatggcccgtgctcatcggatc
ggtcaaaaaaatcatgtgaatgtttaccgtttggtgaccaaagacactgtcgaggaagac
gtcctagaacgagcaaagcgtaagatgatcttggaatacgcgatcatcaatcaaatggat
acatcgggcaagcacgttggaaggaaagaggcttcaaaaccagaaacaaccttcaataag
gatgatttgagtgccatattgaaatttggcgcggctaacctcttcaaaagttcggctgat
cagtcaaaattagagtccatggacctcgacgaaatcatgaacaagggtgaaaacttcgaa
actgaaaccgctccaactggcaccagtcttggtggtgaagatttcttgcaacagtttgct
gtccaggatgtcaaggccgatgtgacctcttgggatgagattattcctctctcagaacga
cagcgcgtggaatctgaacggacggcaaccaccaccaaacaagcgggcgaaggcagaaat
cgtggaacagccacctctcgtgctgccaacggatcaccctccagcaaatccaacgtgata
cctcctgaagatgatcacggtgatgattatgaacccaatggtccgacgaaatcggggcgt
tacaagaagaggaaattaggtggaagattcaaagaggatacgcctgattcgatagctaaa
cccaaagagagccgggattcgagtcaatcgagaagtaaagagttcaactcaaaagagatt
cgtgatctaattcgctcgatccaacactttggtgatatccggcaacgatacgatacgatg
gtcaagtttgccaaattggagtctaaggatcgggaggtgacactgaaatgtgtggatgag
ctcaaggaaatatgcgagcgagctctggcggagaacgaagaagcgatccggctcaaacga
caagctggcgaggaagtcactcctgcaatgaggaataaagcggtattaattgagttcaga
aatgttgctagcattaatgctgagacggtcatgagtcggatgaatgatcttaggctactt
catgacgaactgacgtccgaaagggatcccctcaattggacccatcccgcctcaggcctc
aaatcaacaacagctggctggtcatgtgaatggaatgaggccaaggacaattctctttta
atcggtgcttggcgtcatggattcggtcggtgggatctgattcgggatgaccccgagttg
ggattgtcggattcaatctttttagaagaacctaaacgggtcaagggagaagagcctaaa
gccaaaagtattccgagtggtgtccatctcagtcgacgaggtgactatttactccgggca
ctacgcgaatatcatgagcagcaggaacttgaacagaaagaacaaggtcgcgatgggttt
catggtcaccatgcaaatcagtccacaaatcatcactcctattctgccactgacactcaa
catcgatcttcgagaccatccggcaagacgagtcattcatcccgcccagccaagaagcag
catactcaacagaaacccccacaagctcgtcaccattcccctgcggtgagggccagttca
aagtcgagttcggagctgacagaggaagctgatgaggaagatgaagaactcgaggaggag
gaagatagtatggatgaaggggaatgtaaagaggctatgagaccggtcaaaaaagagttg
aaagaactccgggccgatgaaagtaagactattggcggggctgctcgagctgccatcctc
aaacgtctcataaccgccatcggtcatcatatcgaccattgcgtcaagatcaatcgcggc
gacgagaaaaccaagacgagattaaggcgtcacctttggtcgtttgccgttgaatggtgg
cccagaccagcgggtagcacagaaccgctcatccgggctgacaaaatggagtccatgttc
attcgactgcggagctttgatccgaaggaccaaaaagcacctgatgcgagccccagtatc
ccccagaatgaggccccagctattcaaccagctcaggagtcagcctcttcgcgtactccc
agttcgccccctccccctggctttagacgcatcacgccccggtctccgagccaagatagg
tatgggcgagaagctaggaatgatcctcctagagatagtgttgggaacggttctgttaga
tacgacggggcgaacgggaatagttctcgcaatgagggatggggaaatagtagtaggggc
cccagtaggaatgatggtgacagccgaaacgattcgggtgatgaccgtcgacgaagcggg
ggcggagggaacagtagcaggcgtgtggcgagcggcagtggtagtgggaataatggtagc
catcggaataacaataccaataagcggaggggagccaggccgccgcgaaagaatccgagc
agtaatggactgaccagccagagcggctactaccatccgatcggctatgagagcggcccg
tcggcgccgatccatcttgatggctccgggcccccaccgacggtggcgggatatatcaac
cagcctgcggcgggctcgctttattaccggcctccgtcccattcaccctcctcgatccat
cctcatccggtggccaataatcggggaccatcttactatggctcaccttctggttaccct
tccccttatccggccgcacctcctccggtgccttctacttaccctaaccaccatcctttt
gtgggatcccctcatatcccggacccttctggcttcggccccgctgctcctcctatcccc
cattatcctcatctgcctcagcctcctaatcctttgcctcggccgcctcatcgacctcat
ccttcccaccattga
DBGET
integrated database retrieval system
