KEGG   Puccinia graminis: PGTG_14600
Entry
PGTG_14600        CDS       T02226                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
pgr  Puccinia graminis
Pathway
pgr03013  Nucleocytoplasmic transport
pgr03015  mRNA surveillance pathway
pgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PGTG_14600
  09122 Translation
   03013 Nucleocytoplasmic transport
    PGTG_14600
   03015 mRNA surveillance pathway
    PGTG_14600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgr03019]
    PGTG_14600
   03041 Spliceosome [BR:pgr03041]
    PGTG_14600
Messenger RNA biogenesis [BR:pgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PGTG_14600
    TREX complex
     PGTG_14600
Spliceosome [BR:pgr03041]
 Complex C
  Other components
   EJC/TREX
    PGTG_14600
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PGTG_14600
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz
Other DBs
NCBI-GeneID: 10534864
NCBI-ProteinID: XP_003332304
UniProt: E3KUB0
LinkDB
AA seq 303 aa
MTLLLNHSLDQVRRSRNAGQSTDRNNGKLRQTNDSWKHDLFENGDTKASSNPPRQLRTVD
APGDEEVDQGRSTSLLITNLHYDVSEAELEALFSQIGKLDRGPFIKFDQSGRATEGLAFV
SYANESHAEAAIEAFNGASAKGQPIGVQYEYGIPLWVRTALGISGRQATAEGVPSTFGLL
GRMQQDRPTGRPHFSPYDANRPRGPRSSFPPVGRPRAPSNGRDYRRTADSFGSGIRSRGG
PAHRHSGRPRWTGDRPAARSGAGGVKSARELDKELEAFMGSSASVAATAPVGSTTQTDVQ
MTE
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaccctcctcctcaatcactcacttgatcaagtacgcaggtccaggaatgccggacag
tctaccgaccggaataacggtaaactacgtcaaacgaacgattcgtggaaacatgacctc
ttcgaaaacggtgataccaaagcatcctccaatcctcctcgacagctgcgtactgtcgat
gcccccggtgatgaggaagtcgaccaaggtcgttcgacatcattactcataactaaccta
cactatgatgttagtgaagctgagctggaagcactcttttctcagatcggaaagctcgat
cgtggtcctttcatcaaatttgatcaatcaggacgggcgacggagggtcttgcgtttgtt
tcctacgccaacgaaagccacgccgaagctgccatcgaagcattcaacggggcttctgct
aaaggtcagcctatcggtgtccaatacgaatatgggatcccactttgggttcgaacggca
cttggaatcagtggacgccaggcgacggccgaaggagttccctccacctttggtctctta
ggacgcatgcagcaggatagaccgacgggccggccgcatttttctccctacgacgccaat
cgtccccgtggcccgcggtcctcgttcccgccagttgggagacctcgagcaccatcgaac
ggtcgtgattaccgtcggactgccgacagctttggtagtggtatccggtcccgtggcggt
cctgcgcaccgtcactctggccggcctcgatggaccggcgaccggccggcggctcgtagt
ggagctggaggggtcaagagtgcccgggaattggataaggagttggaggcgttcatgggc
tcctcagcttcagttgccgccactgcaccagtcggttcaacgacacaaactgacgtccag
atgactgaatga

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