Puccinia graminis: PGTG_14725
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Entry
PGTG_14725 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pgr
Puccinia graminis
Pathway
pgr03022
Basal transcription factors
pgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PGTG_14725
09124 Replication and repair
03420 Nucleotide excision repair
PGTG_14725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_14725
03400 DNA repair and recombination proteins [BR:
pgr03400
]
PGTG_14725
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PGTG_14725
DNA repair and recombination proteins [BR:
pgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PGTG_14725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Zn_ribbon_GTF2H2
CDC45
Tfb4
Motif
Other DBs
NCBI-GeneID:
10541710
NCBI-ProteinID:
XP_003333178
UniProt:
E3KWU2
LinkDB
All DBs
AA seq
462 aa
AA seq
DB search
MARPEDTESEEDPDGDWEPGTTGRTGRAKGAQADRTKEAGAQKKHKKKATAYASKDGEGY
SWEEEYKRSWDVLREDESGSLESAVNQLIANKRRRVIRDTTSIQRGIIRHLCLIIDVSLA
MTDRDLRPNRLDMSLTYAKEFVTEFFDQNPISQLCILITKDAIAERLSGLSGNPLDHHKA
LSNKAKLTPSGEPSLQNSLEMARASLSHLPSHGSREVLVIFGSLTTCDPDDINKTLENLE
KDRMRVSMVGLAAEVRICKEICKRTQGQYGVILNEHHFKELLFEAISPPPIAKSTTNGPK
TQSSSLIQMGFPNKITHDAHQVDASTHSFCACHSKLQSTGFICPRCGSKNCEIPTNCSVC
GLTIVSSPHLARSYRHLFPVSNWIEKNANSLSHQTFKCFGCDKELQVNKASQTNDESNGN
SNNATNANNPSINLYHCPRCKNMFCYECDIYHEQLGLCPGCC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaccggaagacacggaatcagaagaagacccggatggcgactgggaacccggg
acaacaggaagaacgggaagagcgaaaggagctcaggcagatcggaccaaggaagccggc
gcacagaagaagcacaagaagaaagcgactgcctatgcgagtaaagatggagagggatac
tcctgggaagaggaatataaacgcagttgggacgttctgagggaagacgaatctggaagt
ttggaaagtgcggtcaaccaactgattgcaaacaaacgccgaagagtcatacgtgatacc
acttcgatccagcgagggatcataagacatctctgcttgataatcgatgtttcgctcgcc
atgaccgatcgcgaccttcgtcccaatcgactggatatgtcgcttacttatgctaaggaa
ttcgtcacggagttcttcgatcagaatccgatcagtcaattatgtattcttatcacgaaa
gatgcgattgccgagaggttgagtggcttgtcaggaaatccgttggaccatcataaggca
cttagcaataaagctaaattgactccttctggggaaccatcattacaaaattcattggag
atggcgcgagctagtttgtcacatctaccatcacatggctcaagggaagttcttgtgatc
tttggctcactcactacatgcgatccagatgatatcaataagactcttgaaaacttagag
aaagatcggatgagagtttcaatggttggcttggctgcagaggtaagaatttgtaaagag
atatgtaaacggacacaaggtcaatacggggtaatattgaatgaacatcatttcaaagag
ctcttgtttgaggcaatttcaccaccaccgatcgccaaatcgacgacgaacgggccgaaa
actcaaagttcgagtctgatccagatgggcttcccaaataagataactcatgatgcccac
caagtcgatgcgtcgacccattcgttctgtgcctgtcattcgaaactgcagtcgaccggc
ttcatttgccctcgttgtgggtccaagaactgcgagatacctaccaattgctcggtctgt
ggtttgactattgtcagctcccctcatctggctaggagttatcgtcatttatttcccgtc
agtaattggatcgaaaagaatgccaattccctctcgcatcaaacttttaaatgttttggt
tgcgacaaagaattacaagtgaacaaagcatcccaaacaaacgatgagagtaatggtaat
tcgaacaatgccactaatgctaataacccttcgatcaatttatatcattgtccccgttgt
aaaaatatgttttgttacgagtgtgacatttatcatgaacagcttggcttatgtcctggt
tgttgttga
DBGET
integrated database retrieval system
