Puccinia graminis: PGTG_15422
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Entry
PGTG_15422 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pgr
Puccinia graminis
Pathway
pgr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGTG_15422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgr03021
]
PGTG_15422
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_15422
Transcription machinery [BR:
pgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PGTG_15422
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PGTG_15422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_C
RcpB
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
10545417
NCBI-ProteinID:
XP_003334185
UniProt:
E3KZP1
LinkDB
All DBs
AA seq
802 aa
AA seq
DB search
MSNLISGPSHHHRSPHTLYNPAPSMSPTPVPHHHQPPPMQGLPTPPPSIGYDVHEFRRFF
SFGLSQLKQNNKYIINDLTTLASVYHHRMATCIVKEIEQYILESHPAHRLIGFYALDSIC
KNLGHPFPELFKASIEHLFLTAYREVEHLNPATKIKFEELLGTWRTGSAAQSELFGPELQ
RKMEDGIFGSWRHGNEAPNSLAFENGVKQLPAIASPAEKASILFDLRRILADRRDIATHA
PTDQANLAQIDTLQQLEQLVATQQLTMSQVEEIRKQLQPLKLAAPPPPPIEQHPAFSTSH
HLSQPPNIFEDSDALAQLNHFLEANPNILQQVMQQSHQAQPPQAAVAQPVLDPTFQNVSD
ILSQFVQPQQTTSLVSEPISQAPLNFNLFDSQHLAAALTALNLPQCNTQQNATPFMREQS
HESAQKLSPSPSSSNSDGNCRLRDHPDPAVMEYEDKIAGLSIELQNASINRVKPSEIADL
LYSDIPQFCRQDGSRFLPGKIGNQRASDQLDRYFRIQRQVHESGQRAQQRMWAQAESTWL
YSQDTDLTGKKAHPRPDGSRSPSTTRRMDEEQEKMAELRRKTVVRPSSSLLASQPCPICL
EPFDTKLDEEEDEFFWINAIESFNETKQTTVFYHATCHFETLRNHKKRMQLKAGGLGQPK
KASRGLSSVANAPDSNKRLANPRALSLTTTPSESEMDNTNKTQLVQSRDHLAKKENVNRF
SLVEFSDQAGLDPDAISRQKIINVDEASSSSISPDRIGSSVLLTASRKRKGPSLSPPRLA
DHQASLDPSSLETGKKPRLIAA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacctcatatccggcccatcccaccatcaccgttccccacatactctctacaac
ccagcaccctccatgtctcctactcctgtccctcatcatcatcaaccgccacccatgcaa
ggcttgcccaccccacctccttccatcggctatgatgttcatgagttccgcagattcttc
tcatttggtttatcgcaactaaagcaaaacaataagtatatcatcaacgacttgactact
cttgccagtgtgtaccatcatcgaatggccacttgtatcgtcaaagagattgagcagtac
atcttagagagccatcccgcccatagactcataggattttacgccctagactcgatctgt
aaaaaccttggccatcccttccccgagcttttcaaagcatccatcgagcatctcttcttg
actgcttacagggaggtcgaacaccttaatccagccaccaaaatcaagttcgaagagctg
ctaggtacctggagaactggctcggcagcgcaatccgaactttttggccccgagctccaa
agaaaaatggaagatggcatcttcggtagttggcgacatgggaatgaagccccaaatagt
ctggcatttgaaaacggggttaagcaactaccagcaatcgcatcgcctgccgagaaagct
agcatcttatttgacctgcgaaggatattggccgaccgacgagacattgccacccatgct
ccaaccgaccaagccaatctagcccagatcgacaccttgcagcagctcgagcaattagtg
gccactcaacagttgactatgtctcaagtcgaggaaattcgcaagcagcttcaacctctc
aagcttgcagctcccccaccaccccccatcgagcaacatcccgcctttagcacgtctcat
cacctttctcagccacccaacatctttgaggactcggacgcacttgcccagcttaatcat
ttcctcgaagccaacccaaacattctccagcaagtgatgcagcagtcacatcaagcccag
cctcctcaagcggctgtggctcagcccgtcctcgaccccaccttccaaaacgtatcagac
attctgtcccagtttgtccagccccagcagaccacctctcttgtctccgaaccaatcagc
caagccccactcaattttaatctgtttgatagccagcatcttgccgctgccttgactgcc
ctcaacttacctcaatgtaacactcaacaaaacgccactccttttatgcgggagcaatct
catgagtcagcccaaaagctcagtccatcgccatcgagctcgaactcagatgggaactgt
agattgcgtgatcacccggatccagcagtgatggagtacgaagacaagattgcgggcctc
tcgatcgagctccagaacgcatccatcaaccgagtgaagcctagcgagatagctgatctg
ctctactcggacatcccccagttttgcagacaggatggcagccgattcttgccgggcaag
atcggcaaccaacgcgcgtctgaccagctagaccgatacttcagaatccagcgccaggtg
cacgagtccgggcagcgtgcacaacagcggatgtgggcccaggccgagtccacctggctg
tactcccaggacacggatctcacgggcaagaaggcccatcccagaccggacggcagtcgg
tctccctcgacgacgaggaggatggatgaggagcaggagaagatggccgagctccggcgc
aagaccgtagtcagaccgagctcgtccctattggcttcccagccctgtccgatctgtctc
gagcctttcgacactaaacttgatgaggaggaggatgagttcttctggatcaatgcgatc
gagagctttaatgaaaccaaacaaaccacggtcttctatcatgctacttgtcattttgag
acccttcgtaatcacaagaaacgcatgcaactgaaggctggagggcttggtcaacccaag
aaagcctcccgaggcctgtcctccgttgccaatgctcctgacagcaacaagcggctagct
aatccccgagccttgtccctcaccactaccccctccgagtctgagatggataacaccaat
aagactcagctcgtccaatcgagagatcatctagccaagaaggaaaacgtcaatcgattt
tccttggtcgaattctccgatcaagctggcttggatcctgatgccatcagtcgtcagaag
atcatcaacgtcgatgaggcctcgtcctcgtcgatctctcccgatcgtatcggctcctct
gtcctgttgaccgctagtaggaaacgtaaaggtccctcgttgtcgccccctaggttggcc
gaccatcaagcttctctcgacccttcttctttggagacaggaaagaaacctagactcatt
gctgcttaa
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integrated database retrieval system
