Puccinia graminis: PGTG_18435
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Entry
PGTG_18435 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgr03009
]
PGTG_18435
04121 Ubiquitin system [BR:
pgr04121
]
PGTG_18435
Ribosome biogenesis [BR:
pgr03009
]
Eukaryotic type
90S particles
Other 90S particles
PGTG_18435
Ubiquitin system [BR:
pgr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PGTG_18435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_LRRK2
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
10531936
NCBI-ProteinID:
XP_003336403
UniProt:
E3L609
LinkDB
All DBs
AA seq
554 aa
AA seq
DB search
MKVKVLSRSLDNFMPIAHGAPAPIHKNLDPTLHPHSRAREYTRAVTATKLNRMFAKPFVG
QLDGHRDSVYTMAKDPLKLTQVASGSGDGDVRVWDLANRISTISLKDAHKGKVTGLTFLP
NRYIGEGRSKTYDQSQASSSKRLSLLDPSGLLDEEEGINEDILADLKENEELHEAEERTS
RLGSRKLLSCGIDKVVKMWDIGPGANFESEQDRLVMTYQGKHGFNSIDHHRHQPLFVTAS
DRIQLWDVTKSSPLSDVSWNSSRAEGSTSKSSDNYSGEQIACVTFSPSETSVLASSGSSS
NRAITLYDLRSNKSLGQLIMKMRVNCLKFNPQQPSTLLAGGEDHQLYTFDIRYMGSATQV
FKDHVGPVMSCDWSPTGRGFVSGSYDRTLRLWSTSDTTLHKKGRSTDVYHTKRMQRIFAS
LYSCDSQYVLSGSDDGAVRIWKAGASEPVGVKSGRELAAKEYRDQLRQKWSSIDTVSKIE
RQRYLPKPIYHAQKLRTEMLEARAKKEDNRQAHSSSKKRKNLASSDRENDKKKAKSGKPK
VINERKKGLLAIQE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaagtgctatcacggtcattggataatttcatgccgattgcccatggggca
ccagcgccgatccacaagaatctagaccctacgctccacccacattcacgtgcacgagag
tacacccgtgcggtgacggcaacgaagttgaaccggatgtttgcgaagccgtttgtgggt
caactggatggccatcgagacagcgtatacacgatggccaaggatccgctcaagttaact
caagtcgcttctggctcaggagatggggacgtcagggtgtgggatctggctaatcggatc
tcgacgatcagcctgaaggacgcacacaaaggcaaagtgaccggcctgacgtttcttcct
aaccggtacatcggcgaaggccgttcgaagacctacgaccaatcacaagcctcctcttca
aagcgcctctcattactcgatcctagtggcttattggatgaggaggaaggaatcaatgaa
gatattctggcagacctgaaggaaaatgaagaactacatgaagcagaagaacgtacgagc
aggctggggagtaggaaactattgagctgtgggatcgacaaggtggtcaagatgtgggac
atcggtccaggtgccaacttcgaatccgaacaggatcgattggtgatgacttatcaagga
aagcatggttttaactctatcgatcaccatcgccatcaacctttattcgtcaccgccagc
gataggattcagctatgggatgtcactaaatcctcacctctgtccgatgtgtcctggaat
tcttctcgagccgagggaagcacatctaagtccagcgacaattactcgggagaacaaata
gcatgtgtgacattttcaccctccgagacgagcgtgctagcctcctcgggctcctcctcg
aatcgggcgatcaccctctacgatctaaggtcgaataagtcattgggtcaactgatcatg
aagatgcgagtcaactgtctgaagttcaacccccagcaaccttcaaccttattagctggc
ggcgaagatcatcagctgtacacttttgatatcagatacatgggttctgcgactcaggtt
ttcaaggaccatgttggacctgtgatgtcatgtgactggtcgccaaccggccgaggattt
gtgtctggctcatatgatagaaccttaagactatggtcgacgtcagacacgactctgcac
aaaaagggacgctcgacagatgtttaccacaccaagcggatgcagcggatctttgcttct
ctctacagttgtgatagccagtacgtcctcagcggtagtgatgacggggcggtccggatc
tggaaggccggcgcttctgagccggttggcgttaaaagtggccgcgagcttgccgcgaaa
gagtaccgggatcagctcagacagaaatggtctagcatcgacactgtctctaaaattgag
agacaaagatatctacctaagccgatctaccatgctcaaaagctgcggacagagatgctc
gaagcacgtgcgaaaaaggaagacaatcgtcaagctcattcctcgagcaaaaaacgtaaa
aatctggcgtcttctgatcgtgaaaatgataagaaaaaagccaaatctggcaaaccaaaa
gtcatcaatgaacgcaagaaaggcttgttggctatccaagaatga
DBGET
integrated database retrieval system
