Puccinia graminis: PGTG_19535
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Entry
PGTG_19535 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgr03036
]
PGTG_19535
Chromosome and associated proteins [BR:
pgr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PGTG_19535
microRNA pathway
RISC loading complex
PGTG_19535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
Helicase_C
SNF2-rel_dom
SLFN-g3_helicase
dsrm
DSRM_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
10543654
NCBI-ProteinID:
XP_003337958
UniProt:
E3LAG4
LinkDB
All DBs
AA seq
1431 aa
AA seq
DB search
MDTKNPGPTGGLHRPDLIKIPRLYQTELLEEAKKRNIIIRADTGTGKTIVAVNLIAWTAV
KTKAKNKNHQIQAFLVPTRPLAHQQAEYIQKHCTLRIKAYTGDLQPELWNIRKWHSELNE
VDVLVSTAQIFYDLISKGYWKLEDVSLLIFDEAHHCRKNHVYNQIMRSHYHRLAKDSTVR
LPKILGLTASPIWNFKDLEKAESDIKSLQSALAAQIYEVKKHTEDVCRHNFKPNEQVVYF
EPAPDFQQLPHPPWDQINKLLSLHASPKMIAAVESVSLDLGTYAYSLAVLDWLKSLLTIG
GSNQLMSGRLVDPNYQERIQSLIKEVEKLVDIDDIPENQLSSKVIALYKILVNYKEKDDH
NNFLCIVFVERRQHAQLLPILLERNVQLKDFLRPAALTGHGSGNENDLIGIKMDSRTQNR
TVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIVM
LPTGTANKYLAFSGKEEQLKAALYDRPQDELIEDGEEESTPQLICQLADGKESILTYSAA
TSLLNDVCQLIPPDEFLPVVAPEYEMMELGERFKCRVTLPPMAALPPSRRTFTGLEMGTK
NGAKRSAAFEACKVLRELGVLNEHFLPQREDKAAQVRDADGREIETTQLADKVEAIISNI
YGDFRTSSEVWLHKLSFPDDSPAGFSTMGLLCARHLTIPDDLQLFDHDPVSRPLSVKIKH
SKKVEWEQDDAPFNLQRLERFTLLVMQVAVNRKPYEGKLYFLVAPLLNDAIEIDWNLVDT
PMIPLSEAADSSRYQCTIVPSRRPRFRIFDTCESAGDLCAASPPSRVPACPSMQHFCKKI
AKFHNLGHFYKTCYDLEDEHLKGDFVYLQTTFQVYNNLLQSVSTLAHPYRTLLPLKLCQG
THIPRTIWKVFSYLPSLTRLLHDSIQATALFMRLDFPMTLLPRGIQALTPPGVGVPWDYQ
TLETVGDAFLKLATSVHVYLSHLRKGEGDMSHVRSKSVDNDYLRRKAIQANLPSSILGQR
FRTDRFRDAQTEDGKELPNGNFSRNVPRRVLSDVVEALLGAGFLTGGIELGLKIGTALDL
CFGGTTPWNERTLNIAFEGTAHDKLASSILLKCQALEEKIGYVFKEKLLLVQALTHRSAN
SFMTNCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELTLARAKLVSNGSLGFLAIKKLG
LHKVIMHKSESFEQACVEAIKAIEPFTSIEEFFSNLENLFVVFDPPKILNDVLEAIVGAV
FIDSRFDLPTVYRTIDKIFEDVTPGLSRIVARDPLSTMLRLRDQYQCAELRRVSTTIKEP
NPEGEDKDPISVRVCRIELHGQEIASGRHASSASVAEQRASLAALKVLQDPSGDSPAPKS
AWLGCQCKARAVSTTAVASSTPAAENKEEIQKEEGSHASQDLPRQMSHLHM
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaagaaccctggcccgactggtggccttcatcgtcccgacttgatcaagata
ccgcgactctaccaaaccgagctgctggaggaagccaagaagcggaacatcatcatccgc
gccgacaccggtaccgggaagactatcgtggcagtcaacttgatcgcatggactgccgtc
aagaccaaggcaaagaacaaaaaccatcagatccaggccttccttgtcccgacccgtccg
ctggcccaccaacaggccgaatacatccagaagcactgtactcttcgcatcaaagcctac
accggcgacctgcagccagagctgtggaatatcaggaaatggcattcagaactgaacgaa
gtcgatgtcctagtctctactgcccagatattttatgatttgatctcgaaaggatactgg
aaattagaagacgtatccttgttaatttttgatgaagcacaccattgtcgtaaaaatcat
gtctacaatcaaatcatgcgaagtcattatcatcgtttggccaaagattccacggtgcgt
ctaccgaagattctaggactgacagcatcgcccatctggaatttcaaggacttggaaaaa
gcagaaagcgatatcaagagtctccagtccgcccttgccgctcaaatatacgaagtcaag
aagcacaccgaagatgtttgtcggcataacttcaaaccaaacgaacaggtcgtatacttc
gaacctgccccagatttccaacaacttcctcatcctccatgggaccagattaacaagctc
ctcagcctgcatgccagtcccaaaatgattgccgccgtcgaatcagtttctctggactta
ggaacgtatgcgtactcgctggctgtcctcgactggctgaaatccctgttgactatcggt
ggctccaatcaattgatgtccggacggctagtggatcccaattaccaagaacgaatccaa
agtttgattaaggaagtcgagaagcttgtggacattgacgatatacccgaaaaccaactt
tcctccaaggttattgcattgtacaagattctagtcaattacaaagagaaagacgaccac
aacaactttctctgcatcgtgtttgtcgaacgcaggcaacatgcacaacttttacccatt
ctgttagagcgcaacgtccagctgaaagactttcttcgtcccgcagccctgactggccat
ggttcaggcaatgagaacgacttgattgggatcaagatggactcgagaacacaaaacagg
actgttgcaaagttcaggacaggcgaacacaatttgacaatcgcaactagtgtggctgag
gagggactggattttcgctcatgcagggtcgttattcgatttgatctgataaccacttgg
aaaggctacattcaatcccgtggacgggcccgagcgcgcgaatctgactacatcgtcatg
cttcctactggtacagcgaacaaatatttagcattcagtgggaaagaagagcagctcaaa
gccgcgctctacgatcgtccgcaggatgagctcatcgaagatggtgaagaagaatcgact
cctcaactgatttgccaacttgccgatggaaaggaatcgatcttgacatacagtgcggct
actagccttttgaatgacgtctgccagctgattccacccgatgaattccttccagtcgtt
gcgccggaatatgagatgatggaattaggagaacggttcaaatgtcgagtgacgttgccc
ccgatggctgctctcccgccttctcggcgtacgttcactggactcgaaatggggaccaag
aacggcgccaaacgctcggccgcctttgaagcctgcaaagtcttgcgagagctgggcgtc
ctaaatgaacatttccttccccagcgagaagataaggctgctcaggtccgtgatgcggat
ggtagagaaattgaaaccacccaactcgcagataaggtcgaagctattatatctaacatc
tacggcgattttcggacctcctccgaagtctggctccacaaactctctttcccggatgat
agtccagccggattctcaacgatgggacttctatgtgctcgtcacctcactattccagat
gacttgcagctattcgatcacgacccagtcagcagaccactatccgtcaaaattaaacac
agcaaaaaagttgaatgggagcaggatgatgcgcccttcaatttgcagaggttagagaga
tttactctactggtgatgcaagttgccgtcaatcgaaagccctacgaaggaaagctgtat
ttccttgtcgctcctctcctcaatgatgccattgaaatcgactggaatcttgtggacact
ccgatgatcccgctttcagaagctgccgacagttcacgttaccaatgtacaatcgtgccg
tcccgacgcccccgtttcagaatattcgatacatgtgaatcggctggtgatctatgtgcc
gcctcaccaccttcgcgggtacctgcttgtccgagcatgcagcacttttgtaaaaagatc
gcgaaattccacaatctgggtcacttttataagacttgttacgacttggaagacgagcat
ttgaagggagactttgtctatcttcaaactacctttcaggtctataataatctcttgcag
tccgtatcaactctggcccatccttatcgaaccctattaccgttgaagctctgtcaagga
acacacatcccacgaacgatttggaaagtattcagttacttaccatcgctgactcgtctt
ttgcacgattcgatccaggcgactgctctcttcatgcgattggattttccaatgactttg
ctaccacgtggaatccaagcactcactccacctggtgttggtgttccttgggactaccaa
acccttgagaccgtgggtgatgcgttcctcaagctagccacctcggtccacgtctatctg
agtcaccttcgaaagggagaaggcgatatgagtcacgtgcgatccaaatcggttgataac
gactacctccggcggaaagcgatccaggcgaatctacccagctcaatcctcggccaacgc
tttcgcacagacagattcagagatgcccaaacagaagacggcaaggagctccccaacggg
aatttctcgagaaatgtgccgaggcgggttttgtccgacgttgttgaggccctgttgggc
gctggttttctcactggcggtatcgaacttggcttgaaaatcggaacggccctggatctt
tgctttggaggtaccacaccctggaacgaaagaacgttaaatatcgcttttgagggcacc
gctcatgacaaactcgcatcatcaatcctccttaaatgccaagcgctcgaagagaagatt
ggctacgttttcaaagagaaattattgttagttcaggctctaactcaccgtagcgccaac
tcattcatgacgaactgttacgagagagaggaatggctgggagatgcagtggtcgacatg
tggatcgtccagcatgcctacaaacgcttcgacaacgcgactgcggaagaactgactctt
gcccgagccaagttggtttctaatggtagtctgggcttcttggcaatcaaaaaactaggt
ctgcataaagtgatcatgcacaaatctgagagcttcgaacaagcctgtgtggaggccatc
aaagccatcgaaccttttacctcgatcgaggaattcttttcaaacctagagaatctcttc
gtggtctttgatccgccgaagatattaaacgacgtcttggaagccatcgtcggtgcggtg
ttcattgatagccgcttcgaccttccgactgtctatcgaaccatcgacaaaatcttcgag
gatgtcaccccaggcttgtcgcggatcgttgctcgcgaccccttgtccacaatgttgaga
ctccgtgaccaataccaatgcgcagagttgcgtcgagtatcaacgacaatcaaggagccc
aatccagaaggagaggacaaggacccaatttcggtgagggtctgtcggatcgagttacac
ggccaagagatcgcgagtggccgacatgcgagttccgcaagtgtggccgaacagagggcc
tcacttgcagccctgaaagttcttcaggacccatctggcgacagtcccgcaccaaaatct
gcgtggttgggatgtcaatgcaaggcgcgggccgtgtccacaacagcggtggcctcctca
accccagctgctgaaaacaaggaggaaatccagaaagaggaaggcagccatgcttctcag
gatctccccagacaaatgagccacctccacatgtga
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