Puccinia graminis: PGTG_20404
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Entry
PGTG_20404 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12859
U5 snRNP protein, DIM1 family
Organism
pgr
Puccinia graminis
Pathway
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_20404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgr03041
]
PGTG_20404
Spliceosome [BR:
pgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PGTG_20404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DIM1
Thioredoxin
DUF5845
Thioredoxin_7
Motif
Other DBs
NCBI-GeneID:
10527738
NCBI-ProteinID:
XP_003338867
UniProt:
E3NXZ9
LinkDB
All DBs
AA seq
199 aa
AA seq
DB search
MSYFLPHLPSGWHVDQAILAEENRVVIIRFGHDWDSECMRMDETLYGISEKVKNFAVIYL
VDITKVPDFTKMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAMDDKQELIDIVETIY
RGASKGRGLVVSPKDYSTRYKYLLSGARPVEDASVSLGSYLSSKAAVGDVQVYTLSSYSC
ELEIGVVLLALTPIGRFVR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtactttctcccacatttaccctccggatggcacgtcgaccaagctatcctggct
gaagaaaatcgggtggtgatcatcaggttcggtcatgactgggattcagaatgtatgagg
atggatgaaacgctctatggaatctcagaaaaagtgaagaatttcgcagtgatctatcta
gtagatatcaccaaagtacccgatttcacgaagatgtacgaattatacgacccttgcaca
gttatgttcttttacagaaataaacatatcatgattgatttgggaacggggaacaacaat
aagatcaattgggcgatggacgacaaacaagaattgattgatattgtggagacgatctat
cgaggggcgagtaagggacgaggtctggtagttagtcccaaggattattcaactcggtac
aagtatttgctttcaggagctagaccagtggaagatgcatctgtttctctgggatcatat
ctctcaagtaaagccgcagtgggagatgttcaggtttataccctgtcatcttacagctgc
gaattagagatcggggtggttttgcttgccctgacaccaattggaagatttgtaagatag
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