Puccinia graminis: PGTG_22510
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Entry
PGTG_22510 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pgr
Puccinia graminis
Pathway
pgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGTG_22510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_22510
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PGTG_22510
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PGTG_22510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-GeneID:
13542063
NCBI-ProteinID:
XP_003888741
UniProt:
H6QUS5
LinkDB
All DBs
AA seq
721 aa
AA seq
DB search
MAQRKLQADIDRVLKLVQQGVTLFEETFDKMTHATNQTSKDKAEADLKTSIKKLQRQRDQ
IKTWLQSNDIKDKSALMEHRKLIETQMERFKACEKEMKTKAFSKEGLSAQQKLDPKEVAK
MEMSHWVSTMVDELGQQIERTEAEVELLRSQTKKKKPTSGSDGRSSELEALNDRRRWHIG
KLELIMRLLENGQISPERVGEVKDDIQYYVESNVEEDFTEDDDLYESLNLQEEEEHYGLH
DDLLSSHDTSSIIEDSNLSGEKSPVKEKMSISGAQILRGPSVRKPTMESGTVRPAIVSGR
TGVVTGMVLPTGSAPRTTPAPLPSLRYASAAAAAASSNVTTTPSVPSSAKSPGPVPAVPQ
RSNSLSLSGTTPGSLPAQPSAESPKKQPQQIPHRPFAAVASPDTKVAALPGSGVSRPMLS
GSDPSSTSQDLISQSADGGSSSSLVHNPSGQSTQSGQSSQSAAEPSPHPITDRSPSPSNS
QKSRQSPPQADGGAMESVPNSGEIKPTGSTSQASDRRGSEIMTGEEKLEDGKRASLQVNN
NGREVEGGQTSNPSQENKSVSSLADLVETYEHLKAHTPSMAEMQKVIETGISGLPQIQDA
EKPYYYAPRNPYPTSSHYPQQPMAFEKRPAIWSEIEVEVLFYLFYYHQGGYLQYLAAKEL
KKRAWRFHKYYLTWFQRAKNPEEMADDYEKGSYTYFDWEADWLMRTKTPFQFDYKHLEDS
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcggaagcttcaggccgacatcgaccgtgttctgaaactggttcagcagggt
gtcaccctgtttgaggagacattcgataaaatgactcatgctaccaatcagacatccaag
gacaaggctgaggccgatctcaaaacatctatcaagaaactgcagcgtcagagggaccag
atcaagacctggctacagagtaacgatatcaaggataaatcggctctcatggaacatcgc
aagttgatcgaaacacaaatggaacggttcaaggcttgcgaaaaggagatgaaaacgaaa
gcctttagtaaagaaggtctcagtgctcaacagaagctggatcctaaggaggtggccaag
atggagatgagccattgggtctccacaatggtggatgaactgggtcaacagatagagcgg
acggaggcagaagtagaactgttacgtagtcagaccaagaagaagaaacctacttccggc
tctgatggcagatcaagtgaacttgaagctctcaatgaccgtcgaaggtggcacatcgga
aaactagagctaatcatgcgacttcttgaaaacggtcagatttcgccagagcgcgtcggc
gaagtcaaggatgacattcaatactacgttgaatcgaatgttgaggaggacttcaccgag
gatgacgacctttatgaatcgctcaatcttcaagaagaggaggaacactatggcctacat
gatgatctgttgtcatcacacgatacaagttcgataatcgaagacagcaatctttctggt
gaaaagagtcctgttaaagaaaaaatgtcgatttcgggcgctcaaattctgcgagggccc
agcgttcggaagccgacgatggaatcagggacagtacgaccagcaattgtttctggaaga
actggcgttgtcactgggatggtgctgcctactggatctgcaccccggactacgcctgca
ccactcccatcgttgcgttatgcaagtgctgcagcggctgctgcttcatctaacgtgaca
accactccaagtgtcccgtccagtgccaagagtccagggccggtacccgccgtccctcaa
cgttcgaattcactttcgttaagcggcaccactcctggatctttgccagcccagccatca
gccgaatcccccaagaagcaacctcagcaaattccacaccgacctttcgccgccgttgct
tctccagacaccaaggtcgccgctctccctggatccggtgtttctcgaccgatgctatct
ggttcggatccttcgagcacgtctcaagatctaatttcccaatcagccgatgggggtagc
agttcgtcgctcgtccacaacccatccggacaatcgactcaatcaggtcaatcaagccaa
tctgccgctgaaccttctcctcacccaatcacagaccgctcgccgagtccctcgaactca
caaaaatcacgccaatctccacctcaagcagatggaggcgcaatggagagtgttcctaat
agcggtgaaatcaagcccactgggtcgactagccaggctagtgaccgacgaggatcggag
attatgacaggagaagaaaagctggaggatggcaagcgcgccagtctacaagtcaacaac
aacggtcgtgaagtagagggaggacagacgagcaacccatcgcaagagaacaagagtgtc
tcctcgctcgccgatttggttgaaacttatgaacacttgaaggctcatacacccagcatg
gccgagatgcaaaaagtgatcgagacgggaatctcgggcttgcctcaaatccaagatgcc
gagaaaccgtactactacgcccctcgtaatccgtaccctactagctcacattatcctcag
caacccatggcattcgaaaaacgtccagctatctggtcggagatcgaagtcgaagtgctc
ttctatctgttctattatcaccaaggcggttatttacaatacttggctgcaaaggaattg
aagaaacgcgcgtggaggtttcacaagtattatctcacctggtttcaacgagccaagaac
ccagaagaaatggcagatgattacgagaagggttcttacacatatttcgactgggaggct
gattggttgatgcggactaagacaccattccaatttgattacaagcatttggaagactca
ttataa
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integrated database retrieval system