Puccinia graminis: PGTG_22575
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Entry
PGTG_22575 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
pgr
Puccinia graminis
Pathway
pgr03420
Nucleotide excision repair
pgr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PGTG_22575
09124 Replication and repair
03420 Nucleotide excision repair
PGTG_22575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgr04121
]
PGTG_22575
03400 DNA repair and recombination proteins [BR:
pgr03400
]
PGTG_22575
Ubiquitin system [BR:
pgr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
PGTG_22575
DNA repair and recombination proteins [BR:
pgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PGTG_22575
TCR (transcription coupled repair) factors
Cul4-CSA complex
PGTG_22575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
RICTOR_M
Motif
Other DBs
NCBI-GeneID:
13542105
NCBI-ProteinID:
XP_003888718
UniProt:
H6QUU3
LinkDB
All DBs
AA seq
1326 aa
AA seq
DB search
MLYLTHAQLPTSTRHALKCDFIAPGVDSLILGKQSTIEVYGIESEGLKLLHQAKVFDVVE
HINSYKKLTDSTSTLLVLTADLNLFTLRFCPKSATIITTASISLHQIGARPADYVQTSIV
DPHGRCVVLHALNGILHVIPLVPGCLSNLRNLDPVLSKRKKANVSTGLASHSRNLHPSHN
DPDCEVYRSFQLRLNEVNVQALNFATLSPNYPPTLLVVYSNHLGDRVLRSRKIDLQAAHC
EQEFFRGYHCCDPATALIIPFSLTGEAGEDSDGVNNGAILIGEETAQLVRFGLVQYSASD
DRGNIREAEATAGQSNQLTEQGVIGGHVLRLPLGHYTCFCPVDGVPNCWLLGDLYGNLIF
LFLKQSTTGTPPSLHYFHAGHVPSPEALVYITSGFVFLASHYGDSQLLKLPSPTSSLNPD
NTASAQPEVITTFPNLAPISDFCVTEDRKSLVNQIVTCSGSHRDGSLRVIKHGIGIRESG
SLEVGGVQRLWALRSSTHVNSVEDFDDRLVLSCADCTRFLALNEDGTIEEIGLFNGFESD
VPTILAGNLLDGSDSTTRYSIQVTSRKIIAGDALVWEPDDAKSITRAALSVTTCAVSLKE
QVVVLCIKDGKFVEKGTYKLLNDISSLAIDQSENFVAAAQWVTNCIEIISVSSSSTICRV
NTDSDFMVNSLKMTNFEGTESDGCRLLIGLGDGKIMNVALGPTGMHVEGDSPRFTTLGIR
PIEFVSMRNATGEFLWANSDQPTIIDRIQNNGRFAYTPVTVQGGSVSSATGLHARFFQDS
LVLASNDEIRIGKLNTTEKMNILKISLGNEQPRRIAHSEDMKAYGVVCARLELDQDTGTI
HRIGTFKVFDDETFQLLYTYNFGPMEQGSSIAAVKLGEEMIEHFVIGTGVIKSTEAEATI
GRILAIRELNSKQDLTAKKRHFELTNVGKLSGAVGGVGGLPNGMFVASANAFVHAFGLKK
GDSGRAFPSGTDTVLAGSVPEMDGGFRLLDTWGGGFVSQTVVTDGTKVLVGDLYKSVVLL
EFDLEHLELAVKARDFSAMSVRPIGAISEREFVAADSEFNMFTVQYDSPTSPGSDGKSDR
PNQDAHREDHGVHLDDGGGSDEDEEQALELEQEEEEEEDQDYNQSSYHDHLQPPHSPTFD
QDQNPAAYGGGSLVPRFIESSLIGETKLIFVTSTGGIGLIAKIHSKKKTKQLARFQSDLS
KISTSVGNLAHSAYRMFKTESRKIPSMGFLDGDFLEGCLDLTPDEVENLVKKMMALKAEE
AQAKATEGDSKPQEAVEDNSQDNPDMHPAPTTTSAPVVPKGQAPLVDRTVDVNQVLDSLA
ELSRLH
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgctctatctcactcatgctcagcttcccacttccacccgacacgctctcaagtgcgat
ttcattgcaccgggtgttgactcactcatactggggaaacaatctaccatcgaagtctat
ggaatcgaatccgagggcctgaaattgcttcaccaggcaaaggtcttcgatgtagtcgaa
catatcaattcttataagaaattgaccgattcgacttctaccctgctggtactcaccgcc
gacctcaacttgtttacgctccggttctgtcctaaatcagctactatcatcaccactgct
tccatctcactccatcagattggtgctcggcctgccgattacgttcaaacctctatcgtc
gatccccacggaagatgtgtcgttcttcatgcgctaaatggtatcctacacgttatccct
ttggtccccggctgtctctccaacctgagaaaccttgatccagtcctcagcaagcgtaag
aaggccaacgtctcaaccggactcgcttctcatagcagaaacctacaccccagtcataac
gatcccgattgtgaagtgtaccggagttttcagcttcgtctcaatgaagtcaacgttcag
gcactcaatttcgccacactttcaccgaactatccgcctactcttttggttgtctattcg
aatcaccttggcgatcgggtcttacggagccgcaagattgatcttcaagccgcccactgc
gaacaagaattttttcgtggctaccactgctgtgatccagcgactgccttgatcattcca
ttctcccttactggtgaggccggtgaagattctgatggggtcaataatggtgcgatattg
atcggtgaagaaactgcccaactcgtacgttttggtctcgtgcagtattcagcgagcgac
gacagaggaaacataagagaagctgaggctaccgctggtcaaagcaatcaattgaccgag
caaggcgtaataggtggccatgtgttaagactaccgcttggacattatacttgtttttgt
ccagtagacggggtacccaactgctggcttctcggagatctctatggcaacctgattttt
ttattcttgaagcaatcgacaactgggacaccaccctcgctgcactactttcacgccggc
catgtgccgtcacccgaagcactggtctacatcacaagtggattcgtctttctcgcctcg
cattacggtgatagtcaactcttgaagcttccttctcccacgtcctcactcaatcccgac
aatactgcatccgcccagccggaggtgatcaccacattccccaacctagccccgatatcg
gacttttgcgtgactgaagatcggaagagcctggtgaaccaaatcgtgacctgcagtgga
tctcatcgcgatggatcgcttagagtgatcaagcatgggatcggaatacgcgagtctggc
tctctcgaggtcggtggtgttcaacggctctgggcgctaagaagttcaacacatgtcaac
tcggttgaggattttgatgatcgtcttgtactttcatgcgccgactgcaccaggttcctg
gcgctgaatgaagatggcacgatcgaagaaattggcctgttcaatggctttgaatctgac
gtccctacaatacttgccggcaacctactagatggctctgactccactactcgctattct
attcaagtgacttcgaggaaaataattgccggtgatgcgttggtttgggaaccagatgat
gcgaagagtataacccgtgctgctcttagcgtcacaacatgtgctgtatccttgaaggaa
caagtcgtagtactatgcatcaaggatggcaaatttgttgagaaagggacatacaaattg
ttaaatgacatctcgagcttagcgatcgatcaaagcgaaaactttgtagcagctgctcaa
tgggttaccaactgcattgaaatcatctccgtatcttcatcatccaccatctgtcgagtc
aataccgattccgatttcatggtcaactcgttaaagatgaccaactttgaggggactgaa
tccgatggatgtagactgctaattggattgggtgatggcaagatcatgaacgtcgccttg
ggaccaaccggaatgcatgtcgagggagactctcctcgattcaccactcttggtatacgc
cctatcgagtttgtatcgatgaggaatgcaacaggagagtttttatgggccaacagtgac
caacccacaatcatcgatcggattcaaaacaatggcagatttgcgtatacccctgtaact
gttcaaggcggatcagtctcatctgcaactggcctccacgctcgttttttccaagactcc
ctcgttttggcatcaaatgacgagatcagaatcggcaaattaaacacgactgaaaaaatg
aacatcctgaagatttcgcttggcaatgagcaacctcgaaggatcgctcattcagaggac
atgaaggcatatggtgtggtttgcgcccgattggaattggaccaagatactgggacaatt
catcggatcgggacgtttaaagtctttgacgatgagacttttcaattattgtacacttac
aactttggacctatggaacaaggttcgagtatagcagctgtgaagttaggagaggaaatg
attgagcatttcgtgatcggaactggcgtgatcaagtctaccgaagctgaagcgacaatt
gggaggatcttggccattcgagaattgaattcgaagcaagaccttactgcgaaaaaacga
catttcgaactaactaatgtggggaaattatcgggagcggtggggggagtaggaggatta
cctaatgggatgtttgtagcttctgccaatgccttcgtccacgcgttcggtctgaaaaaa
ggtgactcgggacgcgcctttccaagtggcacggacacggttcttgcaggttcagtacca
gagatggatggcggattcagattattggatacgtggggcggtggatttgtttctcaaaca
gtcgtcactgatggaacgaaggtattggtcggagatctctacaaatctgtagttctactg
gagttcgatctcgaacatttagaactcgccgtcaaagcgcgtgattttagcgcgatgtct
gtccgaccgatcggtgcgatttcggagcgagagtttgttgcagccgatagtgaattcaac
atgttcactgtccaatatgatagtcctacatcccctggttcggacggcaagtctgaccga
cctaatcaagatgcgcatcgtgaggatcatggtgttcatttggatgacgggggtggtagt
gacgaagacgaagaacaagcactagaactagaacaagaagaagaagaagaagaagatcag
gactacaaccagtcttcctatcacgaccacctccaaccccctcactcacccactttcgat
caagatcaaaacccggctgcctacggaggcggaagccttgtaccgagatttatcgagtca
agtctgatcggtgaaaccaaattgatcttcgttactagtaccggtgggattggcttgatt
gctaagatccattccaaaaagaagaccaaacagttggcccgattccagtccgacttgagt
aagatctccacctccgttgggaatctcgcacattctgcatataggatgtttaaaacggag
tcaaggaaaattccatcgatgggttttctggacggagatttcttggaaggatgtctagat
ctcacgccagatgaagtagagaatctggtgaagaagatgatggccttgaaggccgaggaa
gcccaagccaaagcgactgagggtgacagcaagccacaagaagccgtcgaagataactcg
caagacaatccagacatgcatccagctcctactaccaccagcgcacctgttgtccccaaa
gggcaggccccattggtcgatcgcactgtcgatgtcaaccaggttctggactctttagcc
gaactcagccgattacattga
DBGET
integrated database retrieval system