Pyricularia grisea: PgNI_05727
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Entry
PgNI_05727 CDS
T09406
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
pgri
Pyricularia grisea
Pathway
pgri03013
Nucleocytoplasmic transport
pgri03015
mRNA surveillance pathway
pgri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PgNI_05727
09122 Translation
03013 Nucleocytoplasmic transport
PgNI_05727
03015 mRNA surveillance pathway
PgNI_05727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgri03019
]
PgNI_05727
03041 Spliceosome [BR:
pgri03041
]
PgNI_05727
Messenger RNA biogenesis [BR:
pgri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PgNI_05727
TREX complex
PgNI_05727
Spliceosome [BR:
pgri03041
]
Complex C
Other components
EJC/TREX
PgNI_05727
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PgNI_05727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_PARP14_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
41960667
NCBI-ProteinID:
XP_030983076
UniProt:
A0A6P8B779
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All DBs
Position
I:2318115..2320700
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AA seq
256 aa
AA seq
DB search
MSAGKLDKSLDEIVSSQRRTVGRRGGAARRSTGRPAPAAPVGGIHKNTRAARSAVQKPAP
AKSSGAPGTSKVVVSNMPKDVSEAQIKEYFGQSVGPVKRVEISYGPGGVSRGIATVTFAH
ADGASKAFAELNGLLIDNKPVKVEVVVASADQIPAPKTLSQRVTQNKAQPKSAATDKRGA
TAGKGAGPQANGAKGAKKAAPRKGRNARPAKKTAEELDSEMADYFQGGETNTEAAANGAA
PAATNGGDAAMEDDIL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggaaagcttgacaagtctctcgacgagatcgtctcgtcccaacgccgcaca
gtcggtcgccgcggcggcgccgcccgtcggtccactggccgtccggctcccgctgcccca
gtcggcggtatccacaagaacaccagagccgctcgcagcgctgtccagaagccggcgcct
gctaagtcctctggggctcccggaaccagcaaggttgttgtcagcaacatgcctaaggac
gtgtccgaagcgcaaatcaaggaatacttcggtcaatccgttggacccgtgaagagggtc
gagatctcatacggacctggcggagttagccgtggtatcgctacggttactttcgcccat
gccgatggtgccagcaaagcttttgcggagctgaacggccttcttattgacaacaagcca
gtcaaggtggaggttgtcgttgcgtctgccgaccagatccccgcccccaagaccctgagc
cagcgggtcacgcaaaacaaggcgcagcccaagtctgctgcaaccgacaagcgaggtgcc
actgctggtaaaggtgccggtcctcaagccaacggcgcaaagggtgcgaagaaggctgcc
ccgcggaagggtcgcaacgcacgcccggcgaagaagacagctgaggagcttgactccgag
atggctgactatttccagggtggcgagaccaacacagaggcagcagccaacggagccgcg
cccgcagccaccaatggtggcgatgctgctatggaggatgacatcttgtaa
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integrated database retrieval system