KEGG   Pyricularia grisea: PgNI_05727
Entry
PgNI_05727        CDS       T09406                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
pgri  Pyricularia grisea
Pathway
pgri03013  Nucleocytoplasmic transport
pgri03015  mRNA surveillance pathway
pgri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PgNI_05727
  09122 Translation
   03013 Nucleocytoplasmic transport
    PgNI_05727
   03015 mRNA surveillance pathway
    PgNI_05727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgri03019]
    PgNI_05727
   03041 Spliceosome [BR:pgri03041]
    PgNI_05727
Messenger RNA biogenesis [BR:pgri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PgNI_05727
    TREX complex
     PgNI_05727
Spliceosome [BR:pgri03041]
 Complex C
  Other components
   EJC/TREX
    PgNI_05727
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PgNI_05727
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_PARP14_3 RRM_occluded
Other DBs
NCBI-GeneID: 41960667
NCBI-ProteinID: XP_030983076
UniProt: A0A6P8B779
LinkDB
Position
I:2318115..2320700
AA seq 256 aa
MSAGKLDKSLDEIVSSQRRTVGRRGGAARRSTGRPAPAAPVGGIHKNTRAARSAVQKPAP
AKSSGAPGTSKVVVSNMPKDVSEAQIKEYFGQSVGPVKRVEISYGPGGVSRGIATVTFAH
ADGASKAFAELNGLLIDNKPVKVEVVVASADQIPAPKTLSQRVTQNKAQPKSAATDKRGA
TAGKGAGPQANGAKGAKKAAPRKGRNARPAKKTAEELDSEMADYFQGGETNTEAAANGAA
PAATNGGDAAMEDDIL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgtctgccggaaagcttgacaagtctctcgacgagatcgtctcgtcccaacgccgcaca
gtcggtcgccgcggcggcgccgcccgtcggtccactggccgtccggctcccgctgcccca
gtcggcggtatccacaagaacaccagagccgctcgcagcgctgtccagaagccggcgcct
gctaagtcctctggggctcccggaaccagcaaggttgttgtcagcaacatgcctaaggac
gtgtccgaagcgcaaatcaaggaatacttcggtcaatccgttggacccgtgaagagggtc
gagatctcatacggacctggcggagttagccgtggtatcgctacggttactttcgcccat
gccgatggtgccagcaaagcttttgcggagctgaacggccttcttattgacaacaagcca
gtcaaggtggaggttgtcgttgcgtctgccgaccagatccccgcccccaagaccctgagc
cagcgggtcacgcaaaacaaggcgcagcccaagtctgctgcaaccgacaagcgaggtgcc
actgctggtaaaggtgccggtcctcaagccaacggcgcaaagggtgcgaagaaggctgcc
ccgcggaagggtcgcaacgcacgcccggcgaagaagacagctgaggagcttgactccgag
atggctgactatttccagggtggcgagaccaacacagaggcagcagccaacggagccgcg
cccgcagccaccaatggtggcgatgctgctatggaggatgacatcttgtaa

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