Pyricularia grisea: PgNI_07242
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Entry
PgNI_07242 CDS
T09406
Name
(RefSeq) uncharacterized protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pgri
Pyricularia grisea
Pathway
pgri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PgNI_07242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgri03019
]
PgNI_07242
03012 Translation factors [BR:
pgri03012
]
PgNI_07242
Enzymes [BR:
pgri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PgNI_07242
Messenger RNA biogenesis [BR:
pgri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PgNI_07242
Translation factors [BR:
pgri03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PgNI_07242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
AAA_19
HA2_C
nSTAND3
T2SSE
HA2_N
Zot
FtsK_SpoIIIE
AAA_16
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
41962166
NCBI-ProteinID:
XP_030980555
UniProt:
A0A6P8B078
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MTAFARLPSIGRHHATFGIKHRPLAAKCTTIYPQIYSFSSQELDINSHHVAQSHSSGELS
SGAKHVGFLKTGEWSGLGGPKALQQHMIHRVEMPLNPSSLETMTVPRSIRSRVVQRLPAN
SAEHVHNNVSRRGRRSWMLPLARAILNRQLAARLAAYNANTDLEHLRAQKASLPANSYRK
QVLDLVNGSQFCIVTGATGSGKTTQVPQMILEDAIEQGRGADTCILCLQPRRIAATWVAQ
RVALERGERLGESVGFQVRFQACPAKLEGGTVEFHTVGVFLRKFEDGDRTILDRYSHIVI
DEVHERSIDLDLLLVVLKRAIAERLAKGKNVPKIVLMSASVGDPKQFQEYFADSLPDSNG
PRLPAHKTCPLLSIPGRTFPVSAIYLNDLLPIIRDKYGEQLDLLLENKPHKDEFVKYLDT
ETSSKWDMINMTLKEQHAAFVPIDLVAATIAYIASSGSPGAILVFLPGLKEIAAVSYLLR
DKLGFLGLDFNDTSKFRIHSLHSNVPIAVQNEIFEEIPIGCRRIILSSNIAETSVTVPDV
VHVIDVGKTRGHNYDPTTRVTTQITGWQTKSKAIQREGRAGRTQEGHYYGLYSYSRRLSM
ETTEMPTILRSDLTNTCLSVKALDFRGNAADFFDASITPPSPVAVEEAINNLKAMDALAD
NETITSLGLLLRRIPLHPSLGKMILLGLFFRCLGPMIVLCALPTNASLLEVPLDKRYAAG
QAHKKFLVSGSDHLAQINAFKSLRQMERIGYCEAVKFARTNYLNFSVYQETKLVMGQIEK
VLFGQGLIPAIPKVERRFSNAGGIQLNINSGNEKLLKALLVKGLYPNVAVKQASNNNRTV
VRTPTSGSDFVFLHSSSVNSPNASGDTFRKHSTFVYSQMISQSHIDYMFLSRVSHIDSPL
VMALFGGPLLRPEPHDTVVQQQPLPATNGEKFAFSYEVEGSGNNNPQFRTPAETLVQFRE
HMDAVLNDAFRRLLYQQRGTHFAARTPRTGPPWAGTPELEDLVDRLVRLLNLEYAPFR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctttgcccggcttccgtcgataggccgacatcatgctacgttcggcatcaaa
cataggccgctagcagccaaatgtaccaccatatacccccagatttactctttttcctcc
caagaacttgacataaattcccatcatgtcgctcaatctcactcgagtggtgaattatcc
agtggggctaaacacgttggatttctcaagaccggcgagtggtctggacttgggggcccc
aaggctcttcaacaacacatgatacatcgggtggagatgcccctcaatccatcgtctttg
gagaccatgaccgtcccccggagcatccgatcacgggtagtacagcgtttgcctgccaat
tctgcagaacacgtccacaacaatgtctctcgcagaggtcgaagatcatggatgcttcca
ctcgcacgtgctatcttgaatagacaattagccgcacgtttagcggcatacaatgccaat
accgatctggaacatctcagagcccagaaggcttcgctacccgcgaacagctaccggaaa
caggtgctcgacctagtcaacggcagtcagttttgtatagtgaccggggccaccggctcc
ggcaaaactactcaagtaccacaaatgattcttgaagatgctatcgaacaaggtcgcggg
gcagacacatgtattctgtgcctacaaccacgtcgcattgccgccacgtgggttgcccaa
cgtgttgccttggagagaggcgaacgattaggcgaatctgttggatttcaggttcggttt
caggcttgtcctgccaaattggagggcggcaccgtggaattccacaccgtcggcgttttt
ttgaggaaattcgaagatggagaccgcaccatcttggaccgttactctcacatcgtgatc
gacgaagtccacgagcgatcgatagacttagatttgttgctagtcgttttgaagagggcc
attgctgagagactagccaaggggaagaatgtgcccaagattgtcctaatgagcgcctct
gtcggtgacccgaagcaatttcaagaatactttgccgacagtcttcctgatagcaacgga
ccgagactacccgcacacaaaacctgcccgctcctgtcgatccctggccgtacattccca
gtctcagcgatttatctcaacgaccttcttccgataatcagagacaaatatggcgaacag
cttgatcttttgctggaaaataaaccccacaaagatgagtttgtcaaatatctggacacc
gagacatcttccaaatgggacatgatcaacatgaccttgaaagaacagcatgctgcattt
gtccccatcgacttggtggcagccaccattgcttacattgcctcgtctggaagtcctggc
gccattcttgtcttcctgccgggcctaaaggaaattgctgcggtcagctacctgctgcga
gataagctggggttcttgggtcttgacttcaatgacacctccaagtttaggatccattcc
ctgcactcgaacgtgccaatcgccgtgcagaacgaaatcttcgaggagattcctatcggt
tgccggcgcatcatactttcctccaacatcgccgagacctcggtgacagtacccgacgtg
gtccacgtgattgacgttggaaagaccagagggcacaattatgatccgacgacacgcgtt
accacccagatcacgggctggcagaccaaatcaaaggcgattcagcgggaaggacgcgca
ggccggacacaggagggtcattactacggcctctactcgtattcgcgacgcctgagtatg
gaaaccactgagatgcctacgatacttcggtcagatttgacgaatacatgcctgtccgta
aaggccctagatttccgaggcaatgctgctgattttttcgacgcctcaatcactcccccg
tctcctgttgccgtggaagaggcgatcaacaatctcaaggccatggatgcgctggccgac
aacgagacaatcaccagcctcggcctcctcctccgtcggatccccctccacccgtcgctt
ggaaagatgatactcctggggctgtttttccgatgtttgggcccgatgatagtattgtgt
gctctccccacaaatgcctcacttttagaggtgccactcgacaagcgctacgcggcgggg
caagcgcataagaagtttcttgtctcaggaagtgatcatcttgcccaaataaacgcattt
aaaagtttgcgccagatggagcgaataggctactgcgaggccgtcaaatttgctcgcaca
aactatctaaatttctccgtatatcaagaaaccaagctggttatggggcagattgagaag
gtgttattcggccagggactgatcccagcgatccctaaagtcgagcggcgtttttccaac
gctggcggcattcagctcaacatcaactcgggcaatgaaaagttgttgaaagccctcctg
gtcaagggtctctacccaaacgtggccgtcaagcaggccagcaataacaaccggacggtg
gtcagaacgccgaccagcgggagtgattttgtatttttgcatagttcctcggtcaattcc
cccaacgccagcggcgacaccttcagaaagcattccacgttcgtctacagccagatgatc
tcgcaaagtcacattgattatatgttcttgtcgagagtgtcccacatagatagcccgctg
gtgatggcgctgtttggtgggcccctccttcggcccgagccgcacgacacagtagtgcag
cagcagccgctgccggccaccaacggtgaaaagtttgcgttttcgtacgaggtcgaggga
tcgggcaataacaacccgcagttcaggacgccggctgagacgctggtacagttccgcgag
cacatggacgcggtgctcaacgacgccttccggaggctgctttatcagcagcgtgggacg
catttcgcggctcgcacgcctcggactggtccaccctgggctgggacccctgaacttgaa
gatctggtggacaggctcgtgcgtttgttgaatctcgagtatgctccctttcgctag
DBGET
integrated database retrieval system