KEGG   Pyricularia grisea: PgNI_08639
Entry
PgNI_08639        CDS       T09406                                 
Name
(RefSeq) uncharacterized protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pgri  Pyricularia grisea
Pathway
pgri03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pgri00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PgNI_08639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgri03021]
    PgNI_08639
   03019 Messenger RNA biogenesis [BR:pgri03019]
    PgNI_08639
Transcription machinery [BR:pgri03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     PgNI_08639
Messenger RNA biogenesis [BR:pgri03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PgNI_08639
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_4 zf-CCCH_9 zf-CCCH_2 zf-CCCH_DUS3L zf-CCCH_RBM22
Other DBs
NCBI-GeneID: 41963542
NCBI-ProteinID: XP_030979339
UniProt: A0A6P8AWU3
LinkDB
Position
V
AA seq 274 aa
MASPSVAKIAEAMLAHSAPKYSFSFTPFLQQTYQHSLPSDRPICKVYASGGNCPNGTRCL
ERHVADPSQPSGAQTGYGSGKRDGPAFNSLVCKHWLRGLCKKGDGCEFLHEYNLRRMPEC
NFYIRNGYCQNGEECLYLHIDPQSKLPPCPHYDQGFCPLGPRCSKKHVRRNLCPYYLCGF
CPDGRLCKQGAHPGWNPKLDPPTVKVEKPVGEEDAMGFAARGGAYEDHEDGDRGGQQRGD
RRGGYGQRDGKFGGGGGRGGWRGRGGGHRGRGRY
NT seq 825 nt   +upstreamnt  +downstreamnt
atggcatccccaagcgtcgccaaaatcgccgaggcgatgctcgcgcactctgcgcccaag
tacagcttctccttcacgccgttcctgcagcagacgtaccagcacagcctgccgtccgac
cgaccgatatgcaaagtgtacgcgtcggggggcaactgccccaacggcacgcggtgcctg
gagcggcacgtcgcggacccttcgcagccctcgggcgcgcagacggggtacgggagcggg
aagcgcgacgggccggccttcaacagcctggtgtgcaagcattggctgcgtgggctttgc
aaaaagggcgacgggtgcgagttcctgcacgagtacaacctgcgtcgcatgccagagtgt
aatttttacatacgcaacggctactgccagaacggcgaggagtgtctttacctacacatc
gatccgcagagcaagctgccgccgtgtccgcactacgaccagggcttctgtccgctcggc
cccaggtgcagcaagaagcacgtcaggcggaacctgtgcccgtactacctctgcggcttc
tgtcccgacggcaggctgtgtaagcagggtgctcaccccggctggaatcctaagctcgac
ccgccgacggtcaaggtcgagaagccggttggcgaggaggatgcgatgggttttgcagcg
aggggaggggcctacgaggatcatgaggatggtgataggggtggacagcagaggggtgat
aggaggggaggttacgggcagcgggatgggaagtttggtggcggtggcggaagaggcggc
tggagaggccgtggtggaggtcataggggcaggggacggtactga

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