Pyricularia grisea: PgNI_08944
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Entry
PgNI_08944 CDS
T09406
Name
(RefSeq) uncharacterized protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pgri
Pyricularia grisea
Pathway
pgri03022
Basal transcription factors
pgri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PgNI_08944
09124 Replication and repair
03420 Nucleotide excision repair
PgNI_08944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgri03021
]
PgNI_08944
03400 DNA repair and recombination proteins [BR:
pgri03400
]
PgNI_08944
Transcription machinery [BR:
pgri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PgNI_08944
DNA repair and recombination proteins [BR:
pgri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PgNI_08944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
41963842
NCBI-ProteinID:
XP_030978602
UniProt:
A0A6P8AUL8
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Position
V
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AA seq
490 aa
AA seq
DB search
MSQQPIITLSDHLEKQNGATFKKLYQQPATAFAIFRRMLPPLAKTFVMSLLYMPQPLPLT
ALDSWVKPEAKKNKDQALSILRSMHITTITPVTKEKPIQEMSLTPNFKKSLRLALEGGGS
HNSFGVPSSLPIPPQVDVAFLDKWARSRWDAILHYVVNSVEETDSMEPSKKYNFGGSKLQ
DTVKTLLVQGGLVQRRSSERISITKTGFTFLLQEANAQVWTLLLQWLHSVNEDNTNRAVD
MLSFLFMLGTLELGQAYDTGALSEERRNMLPDLNDFGLVYIPPSNPDQYFPTRLATTLTS
GSSALRSVSSGVAAATAEAGENNTKGAIILETNFRIYAYTSTPLQIAILALFANLKMRFA
GMVTGQLSRHSIKRAISHGITADQIIEYLASHAHEQMHRIAAIRNKPVLPPTVVDQIRLW
QLETERMQVQRGYLFKDFESQAEFKAIADYADEVGVLIWRSDARQLFFASKTAEIANFIK
SEKHRKKLAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaaccgatcattacgttatccgatcatctcgagaagcagaatggcgctact
tttaagaaactataccaacagcccgctacggctttcgccatcttccgccggatgcttccc
ccattagccaaaacctttgtcatgtcgcttctgtatatgccgcagccactgccgcttact
gctctggactcttgggtgaagccagaggcgaagaagaacaaggaccaggcgctttccatt
ctacgttctatgcatattactaccataacaccagttaccaaggagaagccgatacaggaa
atgtcgttgactcccaacttcaaaaagtcactacggttggctcttgagggtggcggctct
cacaattcattcggtgttccatcaagcctgccaataccgccacaggtcgatgtcgcattt
ttggataaatgggcacggtcaagatgggatgccatattacattatgtggtcaacagcgtt
gaagagacggactcgatggagccaagcaagaaatacaactttggaggttcaaaacttcag
gataccgtcaaaactctgctcgtgcagggtgggcttgtccagcgtcgaagctcagaaagg
atcagcatcacaaaaacaggcttcacgttcctcctgcaagaggcaaacgcccaagtatgg
acgttgctcctgcagtggctacacagcgtcaacgaggacaacactaatagggcagttgac
atgttgtccttcctgtttatgcttggcactctggaacttggtcaagcctacgatacaggg
gcactttcggaagaacgccggaatatgctgcctgatttgaacgactttggtctggtatac
ataccgcccagcaatccagatcaatacttccctactcgtctcgccacaaccctcactagt
ggatcttcggcacttaggagtgttagctcaggcgttgcggctgccacggcggaggcgggt
gagaacaataccaagggggccatcattctagagaccaatttccgcatctatgcgtacacg
agcacgccgctccaaatagccattctggcactctttgccaacctaaagatgcgcttcgca
ggtatggttactggacagctcagtcggcactcgatcaagcgtgccatctcccacggcatc
acagccgaccaaatcatcgaatacctagcatcacatgcgcacgagcaaatgcaccgcatc
gcagccatccgcaacaagccagtcctgccacctacagttgtagatcaaatccgtttgtgg
caactcgagacggagcgcatgcaagtccagaggggctacctattcaaggattttgaaagc
caggccgaattcaaggccatcgccgactacgcggatgaggtcggtgttttgatatggcgc
agcgacgctcggcagctattttttgctagcaaaacagcagagattgccaactttatcaag
tcggagaagcaccgtaagaagcttgctgcctag
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