Pyricularia grisea: PgNI_09737
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Entry
PgNI_09737 CDS
T09406
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pgri
Pyricularia grisea
Pathway
pgri03022
Basal transcription factors
pgri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PgNI_09737
09124 Replication and repair
03420 Nucleotide excision repair
PgNI_09737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgri03021
]
PgNI_09737
03400 DNA repair and recombination proteins [BR:
pgri03400
]
PgNI_09737
Transcription machinery [BR:
pgri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PgNI_09737
DNA repair and recombination proteins [BR:
pgri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PgNI_09737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
RdfA
Motif
Other DBs
NCBI-GeneID:
41964627
NCBI-ProteinID:
XP_030978324
UniProt:
A0A6P8ATX5
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MAAVKGKASYKKKDGIVAVSDDRTVVSWVPAATGTPALSIPIDTITNLQQTPDSAAKVAL
KIIAKAATEGGDPVAYLFTFTAPDEARAEANAIKDVLSTILAARSSDTGVVVKSSTPQPA
TNGNAANGSAAMSFASTASNTASKGAPRWFDDNQLRLDIALQQSLMKKDRTLHQTYMEAR
ATKPESISDAAFNSQFWSTRTSLLRAHAIESSQKRATYNVLPTVKPYTDYEGKLKLNVTP
QDIQMIFKQYPLVHRIHKEKVPKDMDEGAFWKGFFESNLARWLKGEETNPAQRNPVFDSH
IRGDKQDALYFEKRMVDPHLPHIIDVQGNDENQGGAKGGNMPDALMRPNAERGAGARWLN
AMSESLMSHANPVDVNNTAATDGNENTYRELILRDLHDDARPDRIVLNVREQARFFDQEA
VLLDDARAYEKQAPQVVLADYAKDLSSLGDAKAGGGIDLHKAIGVYDESGSDDDEEESRQ
RPAHVGSRAARSAAQAHIWDGLGKRLSETQAQSEDEATPLGLSVELAQKAFITNATTTEF
LKQFWNAFLSGDPDRAQELAHHVEALRRSVERIEAVAAEAEKAREQLNAQRRKQIVDEYN
RTGRKLKFDPNSTKGGKKAVMALLGPTLSALSAAQARYEEALVAEGIKPSTEE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaaggggaaagcatcctacaagaaaaaggatggaatcgttgcggtctct
gatgatcggacggtagttagctgggtgcctgctgcgacaggaactcccgccctttctatc
cctattgatacaatcacaaacctacaacaaaccccggactctgcagcaaaggttgcactc
aagatcatagccaaggcagcaacagaaggcggcgacccggttgcatacctcttcaccttt
acagccccggatgaggccagggccgaggccaacgccatcaaggatgtactctctactatt
ctcgcggcccgcagcagtgacacgggcgtggtggtcaagtcctcgacaccacaacctgcc
acgaatggcaatgctgccaacgggtcagcggccatgtcgtttgcgagcaccgcgtcaaat
accgcaagcaagggagcacccaggtggtttgatgacaaccagctgagactagacatagcc
cttcagcagtccttgatgaagaaggatcgcacccttcaccagacctatatggaggcgaga
gccacaaagcccgagtccatctctgacgcagcattcaactctcagttctggtcgaccagg
acaagtctattgcgcgcacatgccatagagagcagccagaaaagagccacatataatgtt
ttgccaacagtgaagccatacacggattatgaagggaagttaaagctgaacgtaacgcct
caagatatccagatgatttttaagcagtaccccttggtacatcgtattcacaaggagaag
gtgcccaaggacatggacgagggcgcgttttggaagggatttttcgaaagcaacctcgct
cgttggctcaagggcgaggagaccaacccggcacagcgtaatccagtgtttgactcgcac
attcgaggcgataaacaggatgctctctattttgagaagagaatggttgatccccatctg
ccacacatcatagacgttcagggaaacgatgagaaccagggtggtgccaagggcgggaac
atgccggatgcgctcatgaggccaaacgccgagaggggcgctggggccagatggctgaat
gctatgagcgagagtcttatgtcgcacgccaaccccgtcgacgtcaacaacacagctgca
acagacggcaacgaaaatacatatcgtgaactcatactacgcgatctacacgatgatgca
cggccggatcgcatcgtgcttaacgtaagggagcaggcccgcttcttcgatcaagaagcc
gttctgttggacgatgcgcgggcgtacgagaaacaagcaccccaggtcgtactggcagac
tatgcaaaagacctgtcgtcactgggagacgccaaggcaggcggtggcattgatcttcac
aaggccatcggggtttacgacgagagtggaagtgatgacgacgaggaagagtctaggcag
aggccggcacatgtcggctcacgcgcggcccgcagcgcggcccaggcccacatctgggac
gggttgggcaagagactgtcggagacgcaggcgcagagcgaggacgaggcaacaccactt
ggactgagcgtagagttggcccaaaaggcgttcatcaccaacgctactacgaccgagttc
ctcaagcagttctggaacgcgttcctctcgggggacccagaccgggcgcaagagttggcg
caccacgtggaggcgctgcggaggtcggtggagcggatagaggcggtggcagccgaggct
gagaaggcgcgcgagcagctcaacgcacagaggcggaaacagattgtggatgaatacaac
aggacgggccgaaagctcaagttcgacccaaacagcaccaagggcggcaagaaggcggtt
atggcgctcctcgggcccacgcttagcgcgctgagtgctgcacaggcccggtacgaggag
gctctggtggcagagggcatcaagccttcgaccgaagaatga
DBGET
integrated database retrieval system