Pedobacter ginsengisoli: CPT03_00300
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Entry
CPT03_00300 CDS
T05145
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CPT03_00300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pgs03011
]
CPT03_00300
Ribosome [BR:
pgs03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CPT03_00300
Bacteria
CPT03_00300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_2
Spt6_S1
PCB_OB
Rrp44_S1
DUF4752
SH3_2
Motif
Other DBs
NCBI-ProteinID:
ATP55013
UniProt:
A0A2D1U074
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All DBs
Position
complement(70399..72333)
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AA seq
644 aa
AA seq
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MAKKQVAEKELEAKTAELQGADARLAEKETIESEADSVSIEQIKSSLATPDQDFDWDADD
KVFGKYSDEDRKKFEDMYTDTFNQITQGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEF
RDTPDLKVGDKVDVFVEAPEDANGQLILSRKRAKTQRSWETINEALDNDRIINGFVKSRT
KGGLIVDIMGVEAFLPGSQIDIKPIRDYDVYVGKTMEFKVVKINHEFKNVVVSHKILIED
DLESQKVEIVSKLEKGQVLEGTVKNITDFGVFIDLGGVDGLLHITDISWGRIEHPKEVLS
LDEKINVVVLDFDDEKKRIALGLKQLTPHPWESLDANLAVGSKVKGKIVTVADYGAFLEI
IPGVEGLIHVSEMSWSQNLRSPQEFLKVGDEIEAEVLTLDRDERKMSLGIKQLTQDPWQN
VAERYPIGSKHTAVVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLD
VVVLELDVESRKLSLGHKQLEENPWDTFETIFTVDSIHQGTVVKVTDKGAVIALPYGVEG
FVPTKHMAKEDGTTIKAEETNDFKIIEFNKDAKRIVVSHARIWEEAKAEAVAEERATKKK
EAKASSNAVKKVKDSVEKSTLGDLGVLAQLKQQMEGEENKAKKS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaacaagtagcagaaaaagaactagaggctaaaacagctgaactacaaggc
gcagacgctcgtcttgctgaaaaagaaaccattgaatcagaagctgattcagtgtcgatc
gaacagatcaaatcatcattagcgacacctgatcaagattttgactgggatgctgatgat
aaagttttcggaaaatactctgacgaagaccgtaaaaagtttgaagacatgtataccgat
actttcaatcaaatcactcaaggtgagattattagcggtactgttgtttcaattaacaac
aaagacgtggtattaaacgttggatttaaatcagacggtttagtatctacttctgagttc
cgtgatacacctgatttgaaagttggcgataaagttgacgttttcgtggaagcccctgaa
gatgctaacggccaattgattttatctcgtaaaagagctaaaactcagagatcatgggaa
actatcaatgaagctcttgacaatgacagaatcatcaacggatttgttaaaagccgtact
aaaggtggtcttatcgttgacattatgggtgttgaggctttcttaccaggttctcaaatt
gacatcaaacctatccgcgattacgatgtatacgtgggtaaaacaatggaattcaaagtt
gttaagatcaaccacgagtttaaaaacgtagttgtatctcataaaatcttaatcgaggac
gacttagaaagccaaaaagttgagatcgtatctaaacttgaaaaaggtcaggttcttgaa
ggaactgttaaaaacattacagatttcggtgtattcatcgatttaggtggtgttgatggt
ttacttcacattactgatatttcttggggccgcatagagcatccaaaagaagtattgagc
ttagacgaaaaaatcaatgttgtagttcttgattttgatgacgagaaaaaacgtatcgca
ttaggattaaaacaattaactcctcacccttgggaatctttagatgctaacttagctgtt
ggttctaaagttaaaggtaaaattgttactgttgctgattacggtgctttccttgaaatc
atccctggtgttgaaggtctaattcacgtatcagaaatgtcttggtctcaaaacttacgt
agccctcaggaattcctgaaagttggcgatgaaatcgaagctgaagttttaactttagat
agagatgagcgtaaaatgagcttaggtattaaacaattaactcaagatccttggcaaaat
gttgctgaaagatatcctatcggaagcaaacatactgctgtagttaaaaacatgactaac
ttcggtgtatttgttgaaatcgaagaaggtattgatggtttaatccacatctctgatctt
tcttggtctaaaaaagttaaccaccctaacgaattcactaaagttggtgatacattagac
gttgttgttcttgaattagatgttgaaagccgcaaattaagcttaggtcacaaacaactt
gaagaaaacccttgggatactttcgaaactatcttcactgtagattcaatccaccaggga
actgttgttaaagtaactgataaaggcgctgttattgctctaccatatggtgttgaaggt
ttcgtacctactaagcacatggctaaagaagatggtactactatcaaagctgaagaaact
aatgatttcaaaatcattgagtttaacaaagatgctaaacgtatcgttgtttctcatgcc
cgtatctgggaagaggctaaagctgaagctgttgctgaagaaagagctactaagaaaaaa
gaagctaaagcatctagcaatgcagtgaaaaaagttaaagattcagttgaaaaatctaca
ttaggtgatttaggagtgcttgcacaattaaaacaacaaatggaaggtgaagagaacaaa
gctaaaaaaagctag
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