Pedobacter ginsengisoli: CPT03_00595
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Entry
CPT03_00595 CDS
T05145
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_00595
Transporters [BR:
pgs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CPT03_00595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ATP55069
UniProt:
A0A2D1U0E7
LinkDB
All DBs
Position
145350..147041
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AA seq
563 aa
AA seq
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MKLKYINHRKLLIAGVFILAAFLNGCKKDLNLVSEDSITDATFWKTGADFKLAANNLYNG
LDRFGFEDTESDIAFNFPNSVSNGNLQPAETVNLWTDSYGYIRSSNNIIEKGSANADQEI
KRYVAEAKFFRAWYYWKLLRLYGGVPLITKVLATNDPALFAPRSSRTETVDFIMKDLQEA
KADLPLQSALASADVGRITQGAALALTARVALFEGTWGKFRADGNATKYLDAAITASRDL
INSGTYGLYTDKGEQSYRYLFLENGDDSRESILDRRYARNILGHDIPYQYDGNGYNPTRK
MVDLYLDKNGLPITSPGTVFKGYGTFVSEFQDRDPRMTMTMIIPGTLTNRVFFPVTKIAN
WPDKPQRNFNTGYILYKYMSEDPLANNSGQNGDASIFDFDRHLIRYAEVLLIYAEAVFEK
AGAISDGDLDLSINKLRDRAGMPHLTNTFVAAHNLDMRNEIRRERTVELTLEGFRYDDLR
RWKTAETELPQDVKGIKITGSEWASKTPYSDPSYLTKVDANGFLIAEKSRKFDPNKDYLQ
PLPTKEVAFYQANGHKLEQNPGW
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaatatataaatcatagaaaattattaatcgctggcgtgtttatacttgcc
gcgtttttaaatggatgtaaaaaagacctcaatctggtttcagaagatagcattaccgat
gctaccttctggaaaacaggtgcagattttaaactggcagcaaataatctgtataacggg
cttgatcgctttggttttgaagataccgaatcagatatcgcatttaacttcccaaattct
gtaagtaacggcaacctgcaacctgctgaaacagtaaatctctggacggatagctatggc
tatatccgctcatccaataacattattgaaaaaggatcggccaatgccgaccaggaaata
aaaaggtatgtggcagaagccaaattcttcagggcatggtattactggaaattacttagg
ctctatggaggcgtgcctttaattacaaaagttttagccaccaatgatcctgctttgttt
gccccaagatcaagcagaacggaaaccgttgattttataatgaaagatttgcaggaagcc
aaagccgacttgcctttgcagtcggcattagcttctgctgatgtcggccggattactcag
ggtgcagcacttgctttaacggcacgtgtggcattatttgaaggaacgtgggggaaattc
agggccgatggcaatgcgacgaaatatctcgatgctgccattaccgcttcacgagacctc
attaatagtggtacctatggcctctatacggataaaggggagcaaagttatcgctatttg
tttttagaaaatggcgatgattcccgtgaatcaatactagatcggagatacgctcggaat
attctaggtcatgacattccttatcagtatgatggaaatggatataacccaaccagaaag
atggtagatctttatctggataagaatggattgccaattacctctccaggaacagtcttt
aaaggatacggcacattcgtctctgaatttcaggacagggaccctcggatgacaatgact
atgatcattcccggaacattaaccaacagggttttcttccccgtaactaagatcgccaat
tggcccgataagccacagcgtaatttcaataccggatatatattgtataaatatatgtcg
gaagacccacttgccaataattccggacagaatggagatgccagtatatttgactttgac
cgacatcttattcgttatgctgaagtattgctcatctatgcagaagcagtttttgaaaag
gctggcgctataagtgacggcgacctcgatctttctattaataaactcagggatcgtgcg
ggtatgccacatctgaccaacacttttgtagctgcccacaaccttgacatgagaaacgag
atcaggagagaaagaaccgttgagcttactttggaaggattccgttatgacgatttgcga
agatggaaaactgccgagacggaattgccgcaggatgttaaaggaattaagatcacaggt
tctgaatgggcttccaaaacaccttacagcgatccaagttacctgaccaaggtagatgca
aatgggtttctgattgctgaaaaaagcagaaagttcgatccgaataaggattaccttcag
ccgcttccaactaaagaggtcgccttctatcaggccaacggtcacaaattagaacaaaat
cccgggtggtag
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