Pedobacter ginsengisoli: CPT03_01305
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Entry
CPT03_01305 CDS
T05145
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_01305
Transporters [BR:
pgs02000
]
Other transporters
Pores ion channels [TC:
1
]
CPT03_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
ATP55194
UniProt:
A0A2D1U119
LinkDB
All DBs
Position
337837..340968
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AA seq
1043 aa
AA seq
DB search
MKRSLTLIFFVCCLLISPFATLAQEVIATGKVTDKSDGKPLPGVTVTLQGTSKATLTDAG
GNFRIAVPSVGSKIVISQLGMIPQTITIASNAPLNITMETDVTALGEVVVVGYGTQKKSN
VTGSISSVKAKDLESMPINRVEQALQGRTSGVTIATNNGQPGSAATVRVRGYTTFAKDGN
NNPLWVVDGVIVDNGGIGYLNQSDIESIEVLKDAASQAIYGARAANGVIIVTTKRGKAGV
LQINYNGFYGTSAAAKKLDLLNASEYATLRNEAARNTNPNATLPFANPDALGKGTDWQDV
IFNNDARRQTHEFSIAGGGDKSTFYSSFGYIKQEGIVASPISKWNRANIRLNSTHKLAKW
ITVGENLGYSHSINSSLGNTNNEFGGPLSSAIGLDPTTPAVETNADLIGKPPYTIANVLK
DKNGNPFGLSPWVGQELINPLAYIQTKLGNYGWDHNIIGNAFAEVQPIKDLVFRSTLGTK
IAFYGDDAFNPVAYLNSSNIRTKNSFVRNWNNVLNYNFENTLSYSKTFGKHNANIIVGQG
IYLDENVKTLNVTFNNIIATNFEQANLNYKPVTADRSADGNDGTVHKVNSLFSRVSYNYD
EKYLFTGIIRRDGSSRFGNNNKFGYFPSFSLGWVPTKEDFWKENSVINFFKIRGGYGVTG
NDQISNFAYNALVSSGRNYTFGTTDVSSIGWSPAAPSNPDLKWEETRQTTLGFDATVFTN
FTIAFDVYKKKTVGVLQYPTLPNYLGVAGAPAQNIGDMENKGLELELGYRKTFGEFNLGV
NGNVSFLKNKVTKLATGKLFIEDEAQSFQGMGNITRTGIGHSFNEFYGYETLGIFQTQAE
IDSYVGPGGTKLQPNAKPGDVKFANLNGDNQIEAADRTYLGSPIPKYTYGLTINMAYKNF
DFVAFGSGAGGNMIFQGLRRLDVTFANWQTEILNRWTPTNPSTTIPRVVEKDDNKNNTNF
TRRYLEKGDYFRLKTLQLGYNIPKSVIQKIGAQRVRVYLMSENLFTITKYTGYDPEIGGT
VFGVDKGIYPQARSFMVGLNVGF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagtcttacacttattttcttcgtttgctgtcttcttatttctccatttgcc
acattggcacaagaagtaatagcaacgggtaaggtaacagacaagagtgatggaaagcca
ttgccaggagttaccgtaacattacaaggcacatcaaaagcaacgctcacagacgcaggt
gggaattttaggatcgcagttccatctgtaggttcaaaaatagttataagccaactgggg
atgattccgcaaacaataactatagctagtaatgcgcctttaaatatcactatggaaaca
gatgttactgcattaggagaagtggtagtagtaggctatggaacacagaaaaagagcaat
gtaacaggctcaatttcgagtgtaaaggctaaagatttagaaagtatgcccataaatagg
gttgaacaagccttacaggggagaacttctggagtaactatagcaacaaacaatgggcaa
ccaggaagtgcagctacagtacgggttagggggtatactacttttgcgaaagacggaaac
aataatcctttatgggtagttgatggggtaattgtagacaatgggggaataggttatcta
aatcaatctgatattgaatcaattgaggttttaaaggatgccgcatcacaagctatttat
ggagcccgggctgcaaatggggttattattgtaacaacgaagcggggtaaagccggggtt
cttcaaattaattacaatggattttatggtacttctgctgcagccaaaaaattagacctg
ttaaatgcatcggaatatgctacacttagaaatgaagcagcaagaaacacaaaccctaat
gcaactttaccattcgcaaatcctgacgcattgggaaagggaaccgattggcaagatgtt
atattcaacaatgatgcaagaagacaaactcatgaatttagcatagccggtggaggagat
aaatctaccttttattcatcttttggttacattaagcaagagggtatagtggcaagtccc
atctctaagtggaacagagctaatattcgtttaaactctacccataaattagcaaaatgg
ataacagtgggagagaacctgggatatagtcattctataaacagtagcttaggaaataca
aataatgaatttggagggcctttaagctccgcaataggtttagatccaactactcctgct
gtagaaactaatgctgatcttattggaaaaccaccttacacgatagcaaatgttttaaaa
gataaaaatggtaatccattcggattatcaccatgggtaggtcaggagctaattaatcca
ttggcttacattcaaactaaacttgggaattatggatgggatcacaacataattggaaat
gcctttgcagaagttcaacccattaaagacctggtatttagatccacattaggaactaag
atcgcattttatggtgatgatgcatttaatccggtggcctatttaaattcatctaatatc
agaactaaaaattcatttgtacgtaattggaataatgtgctgaattacaattttgaaaat
acgctgagttattcaaaaacatttggaaagcataatgcgaatattatagttggacaaggg
atatacctggatgaaaatgttaaaacattaaatgtaacattcaataatattattgcaact
aactttgaacaagcaaacctaaattacaagccagttactgctgatcgtagtgcggatgga
aatgatggaaccgttcataaagttaattcgttgttttctcgcgtatcttacaattacgac
gaaaaatacctttttacaggtattatcagacgcgatggttcatcacgttttggtaataat
aacaagtttggatacttcccttcattttcattaggatgggtacctactaaagaggatttc
tggaaggaaaatagtgttattaatttctttaaaatccgtggtggttatggtgtaaccggt
aatgatcaaatttcaaattttgcatataatgcattggtttccagcggacgtaattatact
ttcggaacaacagatgtaagttctataggatggagtccggcggcaccttccaatccggat
ttgaaatgggaagaaacacgacagactacattaggatttgatgcgactgtatttaccaat
tttactattgcttttgatgtttacaagaagaaaacagttggagtacttcaatatcctaca
cttcccaattatctgggggtagctggagctccggcccagaacattggtgatatggaaaat
aaaggattggaactagaactggggtaccgtaaaacgttcggagaatttaatctgggagta
aatgggaatgtttccttcttaaaaaacaaggttactaaacttgctactggtaaactgttt
attgaagatgaggcacaaagtttccaggggatgggaaatattaccagaacaggtataggc
cattcctttaatgaattttacggttatgaaacgcttggtatttttcaaactcaagcagaa
attgatagttatgttgggccaggtggaactaagttgcagcccaacgcaaaacctggagat
gttaaattcgctaatttaaatggtgataatcaaatcgaggcggctgacagaacttacctg
ggaagcccaattccaaaatatacttatggcttaacgataaacatggcttataagaatttt
gattttgtggcatttggcagtggagctggcggcaatatgatattccagggtttgcgccgt
ttagatgtaacatttgcaaactggcaaactgaaattttaaatcgctggacaccaactaat
ccttcaacaacaataccaagagttgttgaaaaggatgataataagaataacaccaatttc
accagaagatatcttgaaaaaggagattatttcaggttaaaaacattacaacttgggtac
aacattcctaaaagtgtaattcaaaagataggtgcacaaagagtgcgtgtttatttgatg
agcgaaaacctctttactataactaaatatactggctatgatcctgaaattggaggaact
gtatttggagttgataagggtatttatccacaagcgcgttcgtttatggttggattaaat
gttggattttaa
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