KEGG   Pedobacter ginsengisoli: CPT03_01475
Entry
CPT03_01475       CDS       T05145                                 
Name
(GenBank) protein translocase subunit SecDF
  KO
K12257  SecD/SecF fusion protein
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs02024  Quorum sensing
pgs03060  Protein export
pgs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CPT03_01475
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CPT03_01475
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CPT03_01475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pgs02044]
    CPT03_01475
Secretion system [BR:pgs02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CPT03_01475
SSDB
Motif
Pfam: SecD_SecF_C SecDF_P1_head SecD_1st Sec_GG ACR_tran MMPL
Other DBs
NCBI-ProteinID: ATP55224
UniProt: A0A2D1U148
LinkDB
Position
complement(382633..385599)
AA seq 988 aa
MQGKGFIKFMAILLGIVCVYSLSFNFVTSKVEKDAKAYAKGDLDKEKAYLDSMATVPVYP
LFGFNYQFCKEKEINLGLDLKGGMNVTMEISLSELVKSLAGNPDDANFNKALVTAQTQLN
AGGKDFINLFVNEFEKLSPNTKLADFFSNQDNSKLLKPDASNSEVKSFLSKEATSAIDRS
FVIIRSRIDGFGVVSPNMQKQEGTNRILIEMPGVQDKERVHKLLQGSAELQFWQVYNNEE
VYPVMENINKTLASSLKVVDTTATAKTSTDTTAAKSESKLAGLAKNKDTKDSAGVKNAEL
AKSNPLFSVLNIPTYQGQNGQPSLRPGPVIGWVAQKDTAKVNAFFKRPEIASIIPQSYKF
MWSVKPMDIAQSGGAKIFELYAIKSLSADGKPDLGGEAISDARHDYDQKGRPEVTMYMTG
EGAAKWKKITAEASADPNNKKSIAIVLDNTVYSAPTVQNEIPNGISSITGSFTVNDTQDL
ANILKAGKLPAPARIVGEFVVGPSLGEVAIHNGLLSFVLAFVVILVFMALYYNKAGWVAN
LALVINLFFIMGILVSLGAVLTLPGIAGIVLVIGLSVDANILIFERVREELTLGKPTPVA
IKEGFKHAMSSIIDSNVTVFVLGAILYIFGSGPVQGFATTLCIGILSSLFCAVLISRLVF
EYLLDKKSNITFGNKYTIHAFKNIAFNFVGHRKLYYSISSAIIILGFIFYFKNGGLNLGI
DFKGGRTYIVHFDKGMHTEEVKATLNSSFPESETIVKTAGADNELKITTTYHITDQDQGA
DKLVEKALHEGLAKTGVKYTIESNEKVGPIIASDIVYGAYGAILFSCLVMFFYIVVRFKK
LNYGLGAVIALFHDVLLVLSFYTILDGVLPFSLEIGQDFIAAILTVMGYTMTETVVVFDR
IREKLAESGKEDLHGEERNKLINFALNSTLSRTILTSLTVFFVLLVIFIFGGASIRGFIF
ALLIGRIIGTYSSLCISTPIVIDLGKNK
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgcagggtaaaggttttataaaatttatggcgatccttctgggtatcgtctgtgtgtat
tctctctcattcaactttgttacttctaaagttgaaaaagacgcaaaagcttatgctaaa
ggagacctggataaggaaaaagcttatttagactcgatggcaacagtaccggtatatcct
ctttttggatttaattaccagttctgtaaagaaaaagaaataaaccttggtttagactta
aaaggtggtatgaacgtaacgatggaaatttcgttatcagaactggttaaatctttagcc
ggaaatcctgatgatgctaatttcaacaaagcgttggttactgctcaaactcaattgaac
gctggtggtaaagatttcattaacttgtttgttaacgaatttgaaaaactttctcctaac
acaaaattagctgacttcttttctaaccaggacaactctaaacttcttaaacctgatgcc
agcaattcagaagtaaaaagctttttatcaaaagaagctactagtgctattgaccgttca
ttcgtgatcatcagaagtcgtattgatggtttcggagttgtaagtccgaacatgcagaaa
caagaaggtactaaccgtatccttattgagatgccaggtgttcaggacaaagaaagggtt
cacaaattattacaaggttctgccgaattacaattctggcaagtatacaacaacgaagag
gtgtatccggttatggagaacatcaacaaaacacttgcatcttctttaaaagttgttgat
acaactgcaaccgcaaaaacttctactgatactactgctgctaaatcagaaagtaaatta
gcaggtttagctaaaaataaagacactaaagattcggccggagttaaaaacgctgagctt
gcaaaatctaatcctttattctcggtattaaacatccctacttaccaaggtcagaacgga
cagccttcattacgtccgggaccagttattggttgggttgctcaaaaagatactgctaaa
gtaaacgctttctttaaaagacctgaaattgcttctatcattcctcagagctacaaattc
atgtggagtgttaagccgatggacattgctcaatcaggtggcgcaaagatttttgaattg
tatgcaatcaaatctctatctgctgatggtaaacctgatttaggtggtgaggcaattagt
gatgcccgtcatgattacgatcaaaaaggtcgcccagaggtaaccatgtacatgactggt
gagggtgctgcaaaatggaaaaaaattactgctgaagcttctgctgatccaaacaataaa
aaatctattgctattgtattagataatacagtttactctgcacctactgtacaaaatgaa
atccctaacggtatttcttctattacaggaagtttcactgttaacgatactcaggattta
gcaaacatcttaaaagcaggtaaacttcctgctcctgccagaattgttggtgaattcgtt
gttggtccatcacttggtgaggttgctattcacaacggtttattatcattcgtactagcg
tttgttgttatccttgtatttatggctttatattataataaagcaggatgggttgctaac
cttgcattggtaatcaacttattctttatcatgggtatcttggtatcactgggtgctgtg
ttaacattgcctggtattgctggtatcgtattggtaattggtttatcggtagatgcgaac
attcttatatttgaacgtgttagggaagaacttactttaggcaaacctactccggtagct
attaaagaaggcttcaaacatgcaatgtcatctatcattgactcaaacgttacagtattt
gtattaggtgctatcctttacatctttggtagtggcccggttcaaggttttgctactaca
ttatgtattggtattttatcatctctattctgtgcggtattaatctcacgcttagttttt
gaatatcttttagataaaaaatctaacatcacttttggtaacaaatacactattcacgcg
tttaaaaatattgccttcaactttgttggtcatagaaagctttactattctatttcatca
gcaatcattattttaggttttattttctacttcaaaaatggtggtttaaaccttggtatc
gactttaaaggtggtagaacttatatcgttcacttcgataaaggaatgcacactgaagaa
gttaaagctactttaaattcgtctttccctgagtcagaaactattgttaaaactgcaggt
gctgataatgaactaaaaattacaactacttaccacattactgatcaggatcagggtgct
gataaattagttgagaaagctttacatgaaggtttagcaaaaaccggtgttaaatacact
attgaaagtaatgagaaggtaggtcctattattgcgagtgatattgtttacggagcttac
ggagcaattctattctcttgtttagtgatgttcttctacatagtagtaaggtttaagaaa
ctaaactatggtttaggtgcggttatcgcattgttccatgatgtgcttctggtactttca
ttctacacaatattagatggcgtattaccattctcattagaaattggacaggactttatt
gcagcgatcttaacggtaatgggttataccatgactgaaacagtagttgtgtttgaccgt
atccgtgagaaacttgctgaaagcggtaaagaagatcttcatggcgaggaacgtaataaa
ttaatcaactttgcattgaacagtactttaagtcgtactattttgacttcattaactgta
ttcttcgtattattggtaatcttcatcttcggtggagctagtatccgtggatttatcttt
gctttattgattggtcgtattatcggtacatactcatcattatgtatctctacccctatc
gttattgaccttggtaagaacaaataa

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