Pedobacter ginsengisoli: CPT03_02765
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Entry
CPT03_02765 CDS
T05145
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPT03_02765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_02765
Enzymes [BR:
pgs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CPT03_02765
DNA repair and recombination proteins [BR:
pgs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPT03_02765
Prokaryotic type
CPT03_02765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
FragX_IP
Motif
Other DBs
NCBI-ProteinID:
ATP55458
UniProt:
A0A2D1U1G7
LinkDB
All DBs
Position
complement(678150..678827)
Genome browser
AA seq
225 aa
AA seq
DB search
MSITLEKSWLKELDAEFEKSYMKDLKTFLQQEKQKGITVYPKGSEVFNALDHTPFDKVKV
VILGQDPYHGQGQAHGLSFSVQKGVTVPPSLKNIYKELVTDIEGFSTPSHGNLTKWADEG
VLLLNATLTVRAHEAGSHQGKGWEIFTDKIINQLSEHRKGLVFLLWGRYAQNKSTLIDQT
KHTILTAAHPSPFSAYNGFFGCRHFSKANAILEKQGLSAINWQII
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattactttagagaagagctggcttaaagaactagatgccgaatttgaaaagagc
tatatgaaagatctaaaaactttcttacagcaggaaaagcaaaaaggcatcacagtatac
cctaagggatcagaggtttttaatgcattagatcataccccatttgataaagttaaggta
gtgattttagggcaagacccttatcatggacaaggacaggctcatggtttatctttttca
gttcaaaaaggtgttacagttcctccttctttaaagaacatatataaagaacttgttact
gatattgagggattttcgactccttcccatggcaatttaaccaaatgggctgatgaagga
gttttgttgcttaatgctactttaacggtcagagcccacgaagcaggatctcatcagggt
aagggttgggaaatatttaccgacaaaataataaatcaactatctgaacatagaaagggc
ctagttttccttttatggggtagatatgcccaaaataaatcgacattaattgatcagacc
aaacacactattttgacggcagcccatccatctcctttctcggcctataatggatttttt
gggtgcaggcatttttctaaggccaatgctattttagaaaaacaaggtcttagtgcaatt
aactggcaaattatctaa
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