Pedobacter ginsengisoli: CPT03_03105
Help
Entry
CPT03_03105 CDS
T05145
Name
(GenBank) cystathionine gamma-synthase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00260
Glycine, serine and threonine metabolism
pgs00270
Cysteine and methionine metabolism
pgs00450
Selenocompound metabolism
pgs00670
One carbon pool by folate
pgs01100
Metabolic pathways
pgs01110
Biosynthesis of secondary metabolites
pgs01230
Biosynthesis of amino acids
Module
pgs_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CPT03_03105
00270 Cysteine and methionine metabolism
CPT03_03105
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CPT03_03105
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CPT03_03105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgs04147
]
CPT03_03105
Enzymes [BR:
pgs01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
CPT03_03105
Exosome [BR:
pgs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CPT03_03105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ATP55521
UniProt:
A0A2D1U1Q7
LinkDB
All DBs
Position
751609..752748
Genome browser
AA seq
379 aa
AA seq
DB search
MKFATKAIHAGQEPDPTTGAVMTPIYQTSTYWQKSPGDHKGYEYSRGTNPTRKALEDCLA
ALENAKYGLAFSSGMGATDTVLRLLKPGDEVITGNDLYGGSYRIFTKVYEKYGIKFHFLD
LSKPENILPHINENTKLVWIETPTNPTMRIIDIEGVAKITKQHKLILTVDNTFASPYLQN
PMDFGADIVMHSVTKYIGGHSDVVMGALLVNDDQLYKDLWFIYNACGATPGPQDSFLVLR
GIKTLHLRMKAHCENGEKVARYLKNHPKIDKIYWPGFEDHPNHDIAKKQMRGFGGMVSIT
LKGADLKETFRVASSFKVFTLAESLGGVESLINHPTTMTHGSIPKEEREKVGVTDNLLRL
SVGVEDIDDLLADLEQALK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcaactaaagcaatccatgccgggcaagagcctgatcctactacaggagca
gtgatgacaccgatttatcaaacctctacttattggcaaaaatcgccgggagaccacaag
ggttatgagtattcgagaggtactaaccccacacgtaaagcacttgaagattgtttggcg
gcattggaaaatgcaaagtacgggctggctttttcgagcggaatgggcgctactgatact
gttttaaggttattgaagccaggtgatgaggtgattacagggaatgacctgtatggtggt
tcttaccgcatatttactaaggtttatgaaaaatatggcattaaatttcatttccttgat
ttatcgaaaccggagaatatattgcctcacataaatgaaaacaccaagctggtttggatt
gaaacacctaccaacccaactatgaggattattgatattgaaggggttgccaaaattacg
aagcaacacaaattaattcttactgttgataatacatttgcgtctccatatctgcagaat
ccaatggattttggtgccgatattgtgatgcattctgtaaccaaatacattggtggccac
tctgatgtggtgatgggcgctttgcttgtaaatgacgatcagctttataaggatctttgg
tttatatataatgcctgcggagcaactccgggacctcaggattcatttttagttttaaga
ggaattaagacgcttcatttaagaatgaaggcacattgtgagaatggagagaaggtggcg
cgttatcttaaaaatcatccaaagattgataagatctactggccgggctttgaagatcat
cctaatcatgatattgctaaaaagcaaatgcgtggttttggtgggatggtatctataact
ttaaagggtgcagaccttaaggaaactttccgtgttgcttcttcttttaaggtttttaca
ctggctgaatctttaggtggggttgaatcattaattaatcatccaactactatgactcat
ggttctattcctaaagaagagcgtgagaaagtaggggttactgacaacttgttgcgcctg
agtgttggggttgaagatattgatgatttacttgccgatttagaacaggcacttaaataa
DBGET
integrated database retrieval system
