Pedobacter ginsengisoli: CPT03_04460
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Entry
CPT03_04460 CDS
T05145
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_04460
Transporters [BR:
pgs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CPT03_04460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ATP55772
UniProt:
A0A2D1U2C9
LinkDB
All DBs
Position
1099239..1100783
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AA seq
514 aa
AA seq
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MKKLINISVLSILILLGGCKKFLDEKPLAQVALDQFYKNKYDVDAAMAGMYSEFQVEMVG
RSQYTENYLFWGEYRSDNFDRFLIYTKDYIDEMMLNSLTPTNRFSDWTGLYAIIGKANNN
IKYIPRAAELDSRITPELKDNYLAQAYAMRAISYFYIVRVWGDAPIWTEPYEDLKSPSER
PRESKDQVLNTVVIPDLEKAYSLIKKGDKPVVWNIGEGAICAMLADAYMWKKDYPNALKW
MTNLFLAKSPAGSAYAGTNESNLQSADTWKSIFTNPKDSKETIWSIHWDYTKNGCACMET
SWTANNKQIIVDEGIWASWFQPQTTPERNADIRPRQTLDVFTGLPNNKRDRFIKWYPTVA
NPTASDPWPATNEMIPVYITMYRLADIYLLYAEASNGNGDMATALKYLNFVRKRAGLPVY
DAADPLVASKVDMENAILNERQMELFGEGKRWFDLVRTNHVKQVMDPILKRRQLEAGNLE
APGFIEPETRVYWPLNRNVLNSNPKLTQNPGYTD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattaattaatatatccgttttaagcatccttattttattgggaggctgtaaa
aagtttttggatgagaagccgcttgcccaggtagctttagatcagttctataagaacaaa
tatgatgtagatgcagctatggcgggcatgtattctgaattccaggtagaaatggtaggc
agatctcagtacactgaaaattaccttttctggggagaatatcgttctgataacttcgac
aggtttctgatttatactaaagattatattgatgaaatgatgttgaatagcttaacacct
acgaacaggttttcggactggacaggtctttatgccattattggtaaggctaataataat
ataaagtatatcccaagggcagcagagctggacagcaggataactccagagcttaaagac
aactatttggcgcaggcctatgcaatgcgggctatcagctatttttacattgtaagggtt
tggggtgatgccccaatctggactgagccttatgaggatttgaaatctccttctgaacgc
ccacgggaatcaaaagatcaagtgcttaatacagttgttatacctgatctggaaaaggct
tatagtttgattaaaaagggcgataaaccagtagtatggaacataggcgagggagccatc
tgcgctatgctggccgatgcttatatgtggaagaaggattatccaaatgcattaaaatgg
atgacaaatctattccttgccaaatctcccgccggttctgcgtatgcaggcacaaatgaa
agcaatcttcaatcggcagatacatggaaaagtatttttaccaatccaaaagatagcaaa
gagacgatttggagcatacactgggattataccaaaaacggatgtgcatgcatggaaaca
tcatggactgcaaataacaaacagatcatagtagatgagggtatatgggcttcatggttt
cagccgcaaactactcctgaacgtaatgccgatatcagaccaagacaaacgctagatgta
tttacgggtttacctaataataaaagagataggttcattaaatggtaccctacagtggca
aaccctacagcgtcagatccatggcctgccaccaatgagatgataccggtatacattacc
atgtaccgcctggccgacatttatttattatatgcagaggcatcgaacggtaatggtgat
atggcaaccgctttaaagtacctcaactttgttagaaaaagagccggtttgcctgtatac
gatgcagccgatccattggtagcatctaaagtagatatggaaaatgctattcttaatgaa
aggcaaatggaattgtttggagaaggaaaaaggtggtttgaccttgtgcgcacgaatcat
gtaaaacaggttatggaccctatactgaaaagaagacaattggaagcaggtaatcttgaa
gcacctggatttattgagcctgaaacccgcgtgtactggccgctaaacagaaatgtttta
aactccaatcctaaattaactcaaaaccctggttacacagactaa
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