KEGG   Pedobacter ginsengisoli: CPT03_05045
Entry
CPT03_05045       CDS       T05145                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pgs  Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgs03400]
    CPT03_05045
Enzymes [BR:pgs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CPT03_05045
    5.6.2.6  RNA 3'-5' helicase
     CPT03_05045
DNA repair and recombination proteins [BR:pgs03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CPT03_05045
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ATP55874
UniProt: A0A2D1U2Z2
LinkDB
Position
complement(1231223..1233745)
AA seq 840 aa
MILENSKGYKQVINWLKLNKKRPFKFQTDAWQHYAEGYSGLVNAPTGFGKTYSIFLAVVI
DELNKRAELKTKALKSKTKTGLKLIWITPLRSLAKDLARAMREVCDELQLDWIVGVRNGD
TPQSEKLKQKKQMPEVLIITPESMHLLLAQKSTFNYFDQLQCIVADEWHELLGSKRGVMA
ELAISRIKGLLQEQHPERLLRIWGISATIGNMEQAMEVLVPYTDLLKAIIKSDIKKKIVI
KSILPDHIDMLPWAGHLGHKLANKLIPIINKSKTTLIFTNTRGQAELWYQTLLAQDENLA
GLLAIHHGSIDYELRNWIEDALHSGVLKAVVCTSSLDLGVDFKPVDTVVQIGSPKGVARF
LQRAGRSGHSPNETSKIYFLPTHALELVEAAAIKEAAKTEDIESREPIVMSFDTLIQYLV
TLAVGDGFDDEKIYFEIKQTHAFKEILPQEWNWIMQFITTGGDSLTAYNEFSKVNKSTDG
LWKVENRQIAMRHRLHIGIIVSDAMLKVKYLTGGYIGMIEESFISRMKPGSSFTLAGRVL
EFIMVKEMTVLVRKSKLKQAISPSWMGGRMSLTANLGSVLRKKYNETLDKQHSDEELDFI
LPLFERQAKVSHVPKSDEFLIELINTKDGYHFFAYPFEGRQVHEIMAALIAYRLGRVQPI
SLSIAMNDYGFELLSEQPIPLEENVIKDLFSPLNLTDDIVASINATEMARRKFRDIACIS
GLVFQGYPGKYVANKHLQSSSSLFFNVFSDYDKHNLLLRQSYDEAFYQQIEEPRLAAALH
RIQASKIVVVKTDRYTPLCFPIKVDSLRDNMSSEELSQRIERMTSETEKRVQVKRKKATQ
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgatactggaaaatagcaaggggtataaacaggtaataaactggctaaaacttaataaa
aaaaggccttttaagtttcagaccgacgcatggcagcattacgccgaaggttatagcgga
ctggtaaacgcccctaccggatttggcaaaacctattctatatttttagctgtagtaatt
gatgagttaaacaaaagagctgaactgaaaaccaaagcacttaaaagcaaaaccaagacg
ggattaaaactgatctggataacacctctccgatctttagccaaagatctggcacgtgcc
atgcgcgaggtttgtgatgaattgcaactggactggatagtgggcgttagaaatggagat
acgccacaaagtgaaaagcttaagcagaaaaaacaaatgccagaagtgctgattattact
cctgaaagcatgcacttattgctggcacagaaaagcacctttaattactttgatcagtta
caatgtatagttgctgatgaatggcacgaactgctgggcagtaaacgaggggtaatggct
gaactggccatttcaagaattaaaggcctgctacaggaacagcatccggaaaggctattg
agaatttggggaatctcggcaacaattggcaatatggaacaggctatggaggtactggta
ccctatactgatctgcttaaagccataataaaatctgatattaaaaagaaaatcgttatt
aaatcaatactaccagatcatatagacatgctgccctgggcaggtcacttaggccataaa
ctagccaacaaactgatcccaattattaacaagagtaaaaccactttaatatttaccaat
acacgggggcaggccgaactatggtaccagaccttgcttgcccaggatgagaaccttgca
ggtttgcttgccattcatcatggttctatagattatgagttaagaaactggattgaagat
gcactgcactcaggagtgctaaaggcggtggtttgcacctcttcattagatctgggtgtt
gattttaagcctgtagacacggtggtgcagataggatcaccaaagggtgtggccagattt
ttacagcgcgccgggcgtagcggccactcgccaaatgaaacttctaaaatctatttttta
cctacccatgcactggaacttgtagaagccgcagcaattaaggaagctgcaaagactgaa
gatattgaaagcagagagcctatagtgatgtcgtttgatacgctgatccaatacctggtt
accctggccgtaggtgacgggttcgacgacgaaaagatctattttgagattaagcaaaca
catgcttttaaagaaatattaccacaggaatggaattggattatgcaatttattactaca
ggtggagatagtttaacagcttataatgagtttagtaaagtaaacaaaagcacagatgga
ctttggaaagtagaaaacaggcagatagcaatgcgccatcgcctgcacataggcataata
gttagtgatgcaatgcttaaagtaaaatatcttaccggaggctatatagggatgattgaa
gaatctttcatatccaggatgaaacccggcagcagttttacccttgccggcagggtactt
gaatttattatggtaaaggaaatgacagtgctggttagaaagagtaaactgaaacaggcc
attagccccagctggatgggtggccgcatgtcgctaactgccaaccttggcagtgtactc
agaaaaaaatacaatgaaacgctggataaacagcacagtgatgaggagcttgattttata
ttgccgctgtttgaacgccaggcaaaggtatcgcacgttcctaaaagtgacgaattttta
attgaactgatcaatactaaagatggctatcatttctttgcttatccttttgagggcagg
caggttcatgaaataatggctgcattaatagcctaccgacttggccgtgtacagcccata
agcctttctattgccatgaacgactatggctttgaattgcttagtgagcagcccatccct
ctggaagaaaacgtcataaaagacctttttagtcctttaaaccttaccgacgacattgta
gccagcattaatgcaacagaaatggcaagacgaaagttcagggatattgcctgcatatcg
ggactggtttttcagggatatcccggaaaatatgttgccaataaacatttacaatcatca
tcgtcgttatttttcaatgtttttagcgattatgataaacataacttattattgcgccag
tcgtacgatgaggcgttttatcagcagattgaagagcctagactggccgcagcactacac
cgcatacaagccagcaagattgttgtggtaaagactgatcgttatacaccactgtgtttc
cctataaaagttgacagtttaagggataacatgagcagcgaagagctaagccagcgcatt
gagaggatgacttcggaaacagaaaaaagagtacaggtaaaaagaaaaaaagcaacacaa
tga

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