Pedobacter ginsengisoli: CPT03_05555
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Entry
CPT03_05555 CDS
T05145
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00730
Thiamine metabolism
pgs01100
Metabolic pathways
pgs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CPT03_05555
Enzymes [BR:
pgs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CPT03_05555
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ATP55967
UniProt:
A0A2D1U2X4
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Position
complement(1360094..1361977)
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AA seq
627 aa
AA seq
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MKSEKTPTEDVISRSPFPASRKIYVKGQLHDIEVAMREISLSDTKIHNGFGLTEPNPPVT
VYDTSGPYTDPNAHIDVKEGLPRLREKWITDRLDVEQMDSISSDYGKQRLADNKLDSLRF
AHINKPYKAKKGANVSQMHYAKKGIITAEMEYIAIRENQRIDLLNEQLGTQYDVMGHQHK
GHSFGANTPKGYITPEFVRKEVASGRAVIPCNINHPELEPMVIGRNFLVKINANIGNSAV
TSSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNG
KAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRVTGIVSRGGSIMAKWCLA
HHKESFLYTHFEEICEIMKAYDVSFSLGDGLRPGCIADANDEAQFAELETLGELTKIAWK
HDVQTIIEGPGHVPMHLIKENMEKQLEHCSEAPFYTLGPLTTDIAPGYDHITSAIGAAMI
GWFGTAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARF
EFRWEDQFNLSLDPDTAKEFHDETLPADGAKIAHFCSMCGPNFCSMKITQDVREYAVKQG
VDEEDALAKGMAEKSKEFAEKGSEIYL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgaaaaaactccaaccgaagatgtaatcagtcgcagccccttccctgcctcg
cgtaaaatttatgtaaaaggacaattgcacgatattgaagttgcaatgcgagaaattagt
ttgagcgataccaaaatccataatggcttcggcttaactgaaccaaatcctccggtaaca
gtgtacgataccagtggcccatataccgaccctaacgcacatattgacgtaaaagaaggc
ctgccacgactaagagagaaatggataaccgaccgattggatgttgaacaaatggatagc
atatcttcggattatggcaaacaacgtttagccgataataagttggactcattacggttt
gcacacatcaataagccttacaaagcaaaaaagggagctaatgtttcgcaaatgcattat
gctaaaaaaggcattattacagccgaaatggaatacattgctataagggaaaaccaaaga
attgacttattaaacgaacagctgggtacacaatacgatgtaatgggccatcagcataaa
ggccacagctttggtgcaaatactccaaagggatatattacaccagagtttgtacgcaaa
gaagtagcttcgggcagggctgtaattccttgcaacattaaccacccagagttagagcca
atggttattggccggaattttctggttaaaatcaatgccaacatcggtaattcagcggta
acctcttctattgaagaagaagttgaaaaggcagtatgggcatgcagatggggtgcagat
acgataatggacctatcgaccggaaaaaacatccacgaaacacgcgaatggattatcaga
aattctccggttcctattggaaccgtgcctatataccaggcattagaaaaagttaacggg
aaagccgaagatttaacctgggagctctttagagatactttaattgaacaggccgaacaa
ggtgtagattactttactatacatgccggtgtattgctgcgctacatcccgcttacggca
aaaagagtaaccggaattgtatcaagaggtgggtctattatggctaaatggtgccttgcg
catcataaagaaagcttcctttatactcattttgaagagatttgtgagatcatgaaggct
tacgatgtatccttttctctaggcgatggtttaagaccgggctgtattgccgatgccaat
gatgaagctcaatttgctgaattggaaacacttggcgaactaaccaaaatcgcctggaaa
catgatgtgcaaactataattgaaggccctggtcacgtaccaatgcacctgattaaagaa
aacatggagaaacagttggaacattgctctgaagctccattctatacattagggccctta
actactgatattgctcctgggtatgaccacatcacatcggcaattggtgctgccatgata
ggttggtttggaactgcaatgttgtgttatgtaacgcccaaagaacatctgggcttacct
aacaaaaaggatgttaaagatggtgtaattacttataagattgcagctcatgctgccgat
ttagcaaaaggacatcctggtgcgcagtatagagacaatgctttaagtaaggcaagattt
gaatttagatgggaagaccagtttaacctttctcttgatccggatacagcaaaggagttt
catgatgaaaccttaccggcagatggcgcaaaaatcgctcacttctgctctatgtgtggt
ccaaacttctgctcgatgaaaattacacaggatgttagagaatatgcagtaaaacagggt
gttgatgaggaggatgcattggctaagggaatggcagaaaaatcgaaggagtttgcagaa
aaaggcagcgaaatctatttgtaa
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