Pedobacter ginsengisoli: CPT03_06875
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Entry
CPT03_06875 CDS
T05145
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00300
Lysine biosynthesis
pgs00470
D-Amino acid metabolism
pgs01100
Metabolic pathways
pgs01110
Biosynthesis of secondary metabolites
pgs01120
Microbial metabolism in diverse environments
pgs01230
Biosynthesis of amino acids
Module
pgs_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CPT03_06875 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPT03_06875 (lysA)
Enzymes [BR:
pgs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CPT03_06875 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ATP56209
UniProt:
A0A2D1U3M0
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Position
1686933..1688090
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AA seq
385 aa
AA seq
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MFSDKDISHFANLETPFYFYDLTLLQKTLSTCADAAKLYNFHVHYAMKANFNERVLEKIK
DTGFGADCVSGGEVSKAIEVGFKKNQVVFAGVGKSDKEINGALDNDIFCFNVESIQELEV
INELAGKKNKKARVAIRINPNVDAHTHHNITTGLDENKFGINSWDLPLCAETLKKSANLE
FLGIHFHIGSQITNLDVYKNLCVRVNEFAAWFEERGFTVKVLNVGGGLGIDYHNPEQQIP
DFGAYFKIFSEFLNVRSNQEVHFELGRALVGQSSSLISKVLYVKNGKKKNFIILDAGMTE
LMRPALYQAYHKISNISKLAEADAVKYDVVGPICESTDCFGKEVELPTTLRGDLIALNST
GAYGEVMASHYNLRENIVSVYNTDI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgataaagatatatcgcacttcgcaaatttagaaacacctttctatttctac
gatcttactttgctgcaaaaaacgcttagtacttgtgctgatgccgctaagttatataat
tttcatgtgcactatgccatgaaggcaaacttcaatgagcgggttttagaaaaaattaag
gatacaggctttggagctgattgtgttagtggaggtgaagtaagcaaagcgatagaagtt
ggttttaaaaagaatcaggtagtttttgccggtgttggtaaatctgataaagaaattaat
ggggctttggataacgatatcttctgttttaatgtagaatctattcaggagcttgaagtt
ataaatgaattagccggtaagaaaaacaaaaaggccagggtagctattcggattaatcct
aacgtagatgcacacacgcatcataacattaccacaggtttggatgagaataagtttggt
ataaactcatgggatttgccattgtgtgccgagactttaaagaaatcagctaacctggag
tttcttggcattcatttccatattggttctcagataactaatcttgatgtatataaaaat
ctttgtgtacgtgtaaatgaatttgcagcatggtttgaagaaagaggatttaccgtaaaa
gtattaaacgttggtggtggtttgggtattgattatcataatccggaacaacagattcct
gacttcggtgcctacttcaaaatattctcggagtttctaaatgtcagatcaaatcaggaa
gttcattttgaattgggccgtgccttggtagggcaatcttcatctttgataagtaaagta
ttgtatgtaaagaatgggaagaaaaagaactttattattcttgatgcaggaatgacagag
ttgatgagaccggcactttaccaggcatatcataaaatatctaatatttcaaaattagct
gaagcagatgctgtaaagtatgatgttgttggccctatttgtgaaagcacagattgtttt
ggtaaagaggtagaattgccaacaacacttcgtggagatcttattgctttaaatagcact
ggtgcttacggtgaggtaatggcttcgcattacaatttaagagaaaatattgtgtctgtt
tataatacggatatttaa
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