KEGG   Pedobacter ginsengisoli: CPT03_06875
Entry
CPT03_06875       CDS       T05145                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pgs  Pedobacter ginsengisoli
Pathway
pgs00300  Lysine biosynthesis
pgs00470  D-Amino acid metabolism
pgs01100  Metabolic pathways
pgs01110  Biosynthesis of secondary metabolites
pgs01120  Microbial metabolism in diverse environments
pgs01230  Biosynthesis of amino acids
Module
pgs_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CPT03_06875 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CPT03_06875 (lysA)
Enzymes [BR:pgs01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     CPT03_06875 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ATP56209
UniProt: A0A2D1U3M0
LinkDB
Position
1686933..1688090
AA seq 385 aa
MFSDKDISHFANLETPFYFYDLTLLQKTLSTCADAAKLYNFHVHYAMKANFNERVLEKIK
DTGFGADCVSGGEVSKAIEVGFKKNQVVFAGVGKSDKEINGALDNDIFCFNVESIQELEV
INELAGKKNKKARVAIRINPNVDAHTHHNITTGLDENKFGINSWDLPLCAETLKKSANLE
FLGIHFHIGSQITNLDVYKNLCVRVNEFAAWFEERGFTVKVLNVGGGLGIDYHNPEQQIP
DFGAYFKIFSEFLNVRSNQEVHFELGRALVGQSSSLISKVLYVKNGKKKNFIILDAGMTE
LMRPALYQAYHKISNISKLAEADAVKYDVVGPICESTDCFGKEVELPTTLRGDLIALNST
GAYGEVMASHYNLRENIVSVYNTDI
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgttttctgataaagatatatcgcacttcgcaaatttagaaacacctttctatttctac
gatcttactttgctgcaaaaaacgcttagtacttgtgctgatgccgctaagttatataat
tttcatgtgcactatgccatgaaggcaaacttcaatgagcgggttttagaaaaaattaag
gatacaggctttggagctgattgtgttagtggaggtgaagtaagcaaagcgatagaagtt
ggttttaaaaagaatcaggtagtttttgccggtgttggtaaatctgataaagaaattaat
ggggctttggataacgatatcttctgttttaatgtagaatctattcaggagcttgaagtt
ataaatgaattagccggtaagaaaaacaaaaaggccagggtagctattcggattaatcct
aacgtagatgcacacacgcatcataacattaccacaggtttggatgagaataagtttggt
ataaactcatgggatttgccattgtgtgccgagactttaaagaaatcagctaacctggag
tttcttggcattcatttccatattggttctcagataactaatcttgatgtatataaaaat
ctttgtgtacgtgtaaatgaatttgcagcatggtttgaagaaagaggatttaccgtaaaa
gtattaaacgttggtggtggtttgggtattgattatcataatccggaacaacagattcct
gacttcggtgcctacttcaaaatattctcggagtttctaaatgtcagatcaaatcaggaa
gttcattttgaattgggccgtgccttggtagggcaatcttcatctttgataagtaaagta
ttgtatgtaaagaatgggaagaaaaagaactttattattcttgatgcaggaatgacagag
ttgatgagaccggcactttaccaggcatatcataaaatatctaatatttcaaaattagct
gaagcagatgctgtaaagtatgatgttgttggccctatttgtgaaagcacagattgtttt
ggtaaagaggtagaattgccaacaacacttcgtggagatcttattgctttaaatagcact
ggtgcttacggtgaggtaatggcttcgcattacaatttaagagaaaatattgtgtctgtt
tataatacggatatttaa

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