Pedobacter ginsengisoli: CPT03_07950
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Entry
CPT03_07950 CDS
T05145
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CPT03_07950 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_07950 (xseB)
Enzymes [BR:
pgs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CPT03_07950 (xseB)
DNA repair and recombination proteins [BR:
pgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CPT03_07950 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF16
PBSX_XtrA
Nuf2_DHR10-like
Laminin_II
Noelin-1
TPR_22
Motif
Other DBs
NCBI-ProteinID:
ATP56410
UniProt:
A0A2D1U472
LinkDB
All DBs
Position
complement(1925684..1925884)
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AA seq
66 aa
AA seq
DB search
METNLTYEAAYKELTEIAQEIENESVSVDVLADKVKRASELIEFCQTKLRATETEVNKII
KQMENQ
NT seq
201 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaatttaacatatgaggctgcctataaggagctaacagagattgcacaggag
atagaaaatgaatctgtatcagtagatgtacttgctgataaggttaagcgtgcttcggaa
ctgattgagttttgtcaaaccaaacttagagcaaccgaaacagaagtaaataagattatt
aaacaaatggaaaatcaataa
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