Pedobacter ginsengisoli: CPT03_09170
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Entry
CPT03_09170 CDS
T05145
Name
(GenBank) flagellar motor protein MotB
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_09170
Transporters [BR:
pgs02000
]
Other transporters
Pores ion channels [TC:
1
]
CPT03_09170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF5853
TSP_3
DUF2490
BfiI_DBD
TBCA
Motif
Other DBs
NCBI-ProteinID:
ATP56633
UniProt:
A0A2D1U4U8
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All DBs
Position
2221388..2222695
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AA seq
435 aa
AA seq
DB search
MKSKITKAAMILSLVGLSTQLFAQEADSQSSERFSKKYFRTWSVGLNGGMLTHYTPFNNR
TNGNFNTPYEAWGYGGYIKKQVVPGFGIQADFLAGKVKGANVIGGAKSTFESRIDWSAAI
SGNFTIANMSLNQKRNFLSPYATIGAGYMSSAATTNHPAGASTGYDQNWFVPIGAGFKLG
VSKGVNIDLGYTVSFMKANNFDGVTGGANDRFSYAHAGIEIALGRKGTSQLQNFSPIAAI
REESAAESAELRRALSTAEENARRDKEALEAQLGDDDGDGVANKFDKCAGTPANTVVDGA
GCPIKVQREVIKETKVVVTEADRKVVDEAIKNLEFDLGKSTIRSTSYATLNKVAELLIQK
NFSLKLAGHTDNTGSMALNLRLSKDRAESIKTYLVSQGANASRIEATGYGPNQPIASNKT
AEGRQKNRRVEFTLY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaaattacaaaagcagcaatgatattatccctggtgggattatcaacgcaa
ttatttgcacaggaggctgactctcaatcatcagaaagattctctaagaaatatttccgt
acctggtctgttggactaaatggtggtatgttaacacactacactccgttcaacaacaga
actaatggaaacttcaatacgccatacgaggcttggggttacggtggttacatcaaaaag
caagtagtaccgggatttggtatccaggccgatttccttgcaggtaaagttaaaggtgct
aacgttattggtggcgctaaatcaactttcgaatcaagaatcgactggtcagcagctatt
agtggtaactttactatcgctaacatgagtttaaaccaaaaacgtaacttcctttctcct
tatgctacaattggagcaggttatatgtcgtctgcggcaacaactaatcatcctgccgga
gcaagcacagggtacgatcaaaattggtttgttccaattggagctggttttaaattaggt
gtttcaaaaggtgtaaacatcgatttaggttacacagttagcttcatgaaagcaaataac
tttgatggtgtaacaggtggtgctaacgacagattctcttatgcccacgcaggtatcgag
attgctttaggtagaaaaggaacttctcaattacaaaacttcagccctattgccgctatc
cgcgaagaaagtgctgctgaaagtgctgaattaagaagagcattatcaactgccgaagaa
aatgcaagaagagataaagaagctttagaagctcagttaggtgatgatgatggagatgga
gttgctaacaaattcgataaatgtgccggtactcctgcaaacacagtagtagatggtgcc
ggatgtccaattaaagttcaacgtgaagttatcaaagaaactaaagttgttgtaacagaa
gctgaccgtaaagttgttgatgaagccatcaaaaacctagagtttgacttaggtaaatca
actatccgttctacttcatacgctacattaaacaaagttgctgagttgttaattcagaaa
aactttagcttaaaattagcgggtcacacagataacacaggttcaatggctttaaaccta
cgtttatctaaagacagagcagaatctatcaaaacatatttggtatcgcaaggtgcaaac
gcttcacgtatcgaagcaacaggttacggtccaaaccaacctatcgcatctaacaaaact
gccgaaggtcgtcagaaaaaccgtagagtagagtttacattatactag
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