Pedobacter ginsengisoli: CPT03_09575
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Entry
CPT03_09575 CDS
T05145
Name
(GenBank) ribonuclease
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgs03016
]
CPT03_09575
Enzymes [BR:
pgs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CPT03_09575
Transfer RNA biogenesis [BR:
pgs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CPT03_09575
Prokaryotic type
CPT03_09575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ATP56706
UniProt:
A0A2D1U529
LinkDB
All DBs
Position
complement(2322481..2323392)
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AA seq
303 aa
AA seq
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MKFEVTILGSSSATPVYNRNPTAQLLNCNEKFYLIDCGEGTQQQLIKYGFKASKIDYVFI
SHLHGDHYFGLIGLLSSLHLNGRVKPIKIFAPEPLQEILALQFKYSETVIRYPIEFVATQ
TNEPVQIFENADLVVDTFVLNHRIPCTGFKFTQKKRLRKLIVDKLESEHIDIEYYPLLKR
GVDLNLPDGRIILNKDYTTDSDTPKKYGYCSDTLFDERYFGSITDCDLLYHEATFLHDML
DRANVTHHTTALQAGEIAKMTGAVKLLIGHFSSRYKTLQGLLDEARSVFENTELAIEGNT
YTI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaggttactattttagggagcagctctgccacgcccgtatataataggaat
cctacagcacagcttttaaattgtaatgaaaagttttatttgatcgactgtggtgagggt
actcagcagcagttgatcaaatatggctttaaggccagcaagatagattatgtgtttata
agccacttgcatggcgatcactattttggtttaataggtctgctttccagtttacattta
aacggacgcgttaaaccaattaaaatatttgcaccagaacctttacaggaaatccttgcg
cttcagtttaaatactctgaaacggtaatcaggtatcctatagagtttgttgcaactcag
accaatgagcctgttcagatttttgaaaatgccgatctggttgttgatacttttgtttta
aaccatcgaattccatgcacagggtttaagtttactcaaaagaaaagactgcgtaagctt
attgttgataaactagaaagcgagcatattgatattgagtattatccgttgctgaaaaga
ggggttgaccttaatttacctgatggcaggattatattaaataaggattatactactgac
tctgatacgcctaaaaagtatgggtactgttctgataccttgtttgacgaaaggtacttt
ggcagtattactgattgcgatttgttatatcatgaagctacttttttgcatgatatgtta
gaccgggctaatgtaacgcatcataccactgctttacaggctggcgaaatagcaaaaatg
accggagcagtaaaattactcatcggtcacttttcgtcgagatataagactttacaaggc
cttctggatgaagcaagatctgtgtttgaaaacactgaacttgcaatagaaggcaatact
tatactatttaa
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