Pedobacter ginsengisoli: CPT03_11120
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Entry
CPT03_11120 CDS
T05145
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00020
Citrate cycle (TCA cycle)
pgs00640
Propanoate metabolism
pgs00660
C5-Branched dibasic acid metabolism
pgs00720
Other carbon fixation pathways
pgs01100
Metabolic pathways
pgs01110
Biosynthesis of secondary metabolites
pgs01120
Microbial metabolism in diverse environments
pgs01200
Carbon metabolism
Module
pgs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CPT03_11120
00640 Propanoate metabolism
CPT03_11120
00660 C5-Branched dibasic acid metabolism
CPT03_11120
09102 Energy metabolism
00720 Other carbon fixation pathways
CPT03_11120
Enzymes [BR:
pgs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CPT03_11120
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ATP56995
UniProt:
A0A2D1U5X3
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Position
2702432..2703622
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AA seq
396 aa
AA seq
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MNIHEYQGKEILKSFGVAVQEGIVADTVEQAVEAAKKMKTDYNSDWVVIKAQIHAGGRGK
GGGVKLAKNLDEVKERATAILGMQLVTPQTGPEGKKVNKILVAQDVYYPGASETKEFYIS
VLLNRANGRNIIMYSTEGGMDIEEVAEHTPHLIFKEEIDPKVGLQGFQARKIAFNLGLSG
QAFKEMVKFVSALYKAYDSTDSSMFEINPVLKTSDDKIIAVDAKVDLDENALFRHPDYAA
MRDKLEEDPTDVEASESNLNYVKLDGNVGCMVNGAGLAMATMDIIKIAGGEPANFLDVGG
TANAQTVKAGFNIILKDPNVKAILINIFGGIVRCDRVAQGVIDAYKEIGDVPVPIICRLQ
GTNAVEAKQLIDDSGLKVFSAIALKDAADLVTKVLA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccacgaatatcaaggtaaagaaatacttaaaagttttggagtagccgtacaa
gaaggtatagtagccgacacggtagagcaggctgtagaagctgctaaaaaaatgaaaact
gactacaattctgactgggttgtaattaaagctcaaatccacgctggtggtagaggtaaa
ggcggcggtgtaaagcttgctaaaaaccttgatgaggttaaggaaagagctactgctatt
ttaggtatgcagttggtaactccacaaactggtccggaaggaaagaaagttaacaaaatt
ttagttgctcaggacgtatactatccaggtgcatctgaaaccaaagaattctatatcagc
gtattgttaaaccgtgctaacggaagaaacataatcatgtattctactgaaggtgggatg
gatattgaagaggttgcagaacatactcctcatttgatcttcaaagaagagattgaccct
aaagttggtttacaaggatttcaggctcgtaaaatagctttcaaccttggcctaagtggt
caggcttttaaagagatggtaaaatttgttagcgcactttacaaagcttacgacagcact
gactcttcaatgtttgaaatcaatcctgttttaaaaacatccgatgataaaattattgct
gttgatgctaaagtagatctagacgaaaatgcattattccgtcatccggattacgctgca
atgcgtgataaactggaagaagatcctactgatgttgaagcaagcgaatcaaaccttaat
tatgttaaacttgatggaaacgttggttgcatggttaatggagcaggacttgcaatggct
acgatggatattattaaaattgcaggtggagagccggctaactttttagatgttggtggt
actgcaaatgcacaaacagtaaaagctggttttaacattatccttaaagatccaaatgtg
aaagctattctgattaacatatttggcggtattgttcgttgcgaccgtgttgcccaaggt
gttattgatgcctataaagaaattggagatgttccagttccaatcatttgtcgcttacaa
ggaacaaatgctgttgaagctaagcaactaatagatgattcaggattaaaagttttctct
gcaatagcattaaaagatgctgctgatttagttactaaagtattagcttaa
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