Pedobacter ginsengisoli: CPT03_13050
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Entry
CPT03_13050 CDS
T05145
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00470
D-Amino acid metabolism
pgs00550
Peptidoglycan biosynthesis
pgs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPT03_13050 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPT03_13050 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgs01011
]
CPT03_13050 (murD)
Enzymes [BR:
pgs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CPT03_13050 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgs01011
]
Precursor biosynthesis
Amino acid ligase
CPT03_13050 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
AlaDh_PNT_C
Pyr_redox_2
Pyr_redox_3
3HCDH_N
MutL
DAO
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ATP57335
UniProt:
A0A2D1U6V3
LinkDB
All DBs
Position
complement(3155712..3157055)
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AA seq
447 aa
AA seq
DB search
MEKGRIVILGAGESGVGAAMLAQKQGFDVFVSDFGAIATQYKEILEELRVDFEEKQHTVE
KILSAVEVIKSPGIPDKAPIIKDIKKKGIPVVSEIEFAKRYTNAKTICITGSNGKTTTTM
LTYHALKKAGFNVGLGGNIGHSFAALVATAEYDWYVLELSSFMLDDMHEFKADIAVLLNI
TPDHLDRYDYKLGNYAASKMRITQNQTADDVFIYCADDPETLKVLKTTNVSSKMYPFSIR
KKMESGAYLESNIIHINIHLNDELTMSISELALQGKHNIYNSMASGIVAKVLDIRNTSIR
ESMGDFKNIEHRLEHVAKISGVDYINDSKATNVNSTWYALESVGTDVILIMGGVDKGNDY
TMLKDMVHQKVKAIICLGKDNKRIHEAFEEDVEIIVNTFSAHEAVQVAYHLAKKGDTVLL
SPACASFDLFKNYEDRGNQFKTAVKEL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagggtagaattgtaattcttggtgcaggagaaagtggggttggagcagcaatg
ctggcgcagaaacagggttttgatgtttttgtgtcggactttggggctatagccacgcag
tataaagagattttagaggaattgcgggttgactttgaagagaaacaacatactgtcgaa
aaaatattgagcgcagtagaagtgataaaaagtccgggaatacctgataaggccccgatt
ataaaagacattaagaaaaaagggattccggtggtttcggaaattgaatttgcaaaaagg
tataccaatgcgaaaacaatatgtattaccggatcgaacggtaaaacaaccaccactatg
cttacctaccatgctttaaagaaagcaggatttaatgttggccttggcggaaatattggg
catagctttgccgcactggtagcaacagctgaatacgactggtatgtgctggaactttcg
agctttatgctggatgacatgcatgagtttaaggctgatatagccgtactattgaatatt
acacctgaccatttggataggtacgattataaacttgggaattatgctgcatcgaaaatg
cggataacccaaaatcagacagctgatgatgttttcatttactgcgctgatgaccccgaa
actttaaaagttttaaaaacaacgaacgtaagttcaaaaatgtatcccttctctattcgt
aaaaagatggagagcggcgcatacctggaaagcaatatcatacacataaatatacaccta
aacgacgaattaaccatgtctatttcagagttagcccttcagggcaagcataatatttac
aactctatggcttcgggcatagtggccaaagtattagacattcgcaatacttccatccgc
gagagtatgggagattttaagaatattgaacacaggctggaacatgtggcaaagatttcg
ggtgtagattacatcaacgattctaaagccaccaatgtgaattcgacctggtatgcttta
gaaagtgtagggaccgacgtgattctgattatgggtggcgttgataagggtaatgattat
actatgcttaaggatatggtgcaccagaaggtgaaagctattatatgcttaggtaaagat
aataagcgtattcatgaagcttttgaagaggatgtggagattatagtgaatactttttct
gctcatgaagcggtacaggtggcttatcatctggctaaaaaaggtgatacagtattatta
tcgccggcatgtgcaagctttgatttgtttaaaaattacgaagacagaggtaatcaattt
aagactgctgttaaagaattataa
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