KEGG   Pedobacter ginsengisoli: CPT03_14310
Entry
CPT03_14310       CDS       T05145                                 
Name
(GenBank) DNA topoisomerase IV
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
pgs  Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:pgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgs03032]
    CPT03_14310
   03036 Chromosome and associated proteins [BR:pgs03036]
    CPT03_14310
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pgs02048]
    CPT03_14310
Enzymes [BR:pgs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CPT03_14310
DNA replication proteins [BR:pgs03032]
 Prokaryotic type
  DNA Topoisomerases
   CPT03_14310
Chromosome and associated proteins [BR:pgs03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    CPT03_14310
Prokaryotic defense system [BR:pgs02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    CPT03_14310
SSDB
Motif
Pfam: DNA_topoisoIV
Other DBs
NCBI-ProteinID: ATP57562
UniProt: A0A2D1U7K0
LinkDB
Position
complement(3459857..3462796)
AA seq 979 aa
MSDEIENNINEESKHTVIPINGLYENWFLDYASYVILDRAVPHINDGLKPVQRRIMHSLK
EMDDGRFNKAANVIGNTMKYHPHGDASIGDAMVQIGQKELLIDCQGNWGDPVTGDSAAAA
RYIEARLSKFANEVVFNPDTTAWQLSYDGRNNEPITLPVKFPLLLAQGAEGIAVGLATKV
MPHNFLELIDASIESLKGNRPNILPDFFTGGMADFSAYNEGMRGGKIRVRAKITEKDKKT
LVITEIPYSTTTGSVIDSVLSANDKGKIKIKKIEDNTAQNVEIVIHLAPGISPDVTIDAL
YAFTSCEVSISPNTCVIKDDKPQFLSVNDILIENSQNTKNLLKQELEIKLHELQERIFFS
SLLKIFIQEGMYKNADYENSGNFETVVEVLNLLFEPFKPSLYREILPEDFKKLIDKPMSS
ITRFDVKKADDLMKALTDEIKVVKNHLRHLTDYTIAWFQKLRDKYGKGKERKTEIRLFDR
VEASKVALANVKLYLNREDGFVGTGLRKDEFVADCSDIDEIIVFREDGKCIITKVADKTF
VGKGILHAQVFKKGDERTIYNMIYKDGASGVSYIKRFAVVGVTRDKEYDLTKGSKGSKVL
YFTANLNGEAEIVTVQLKPHTKLKKLQFDLDFAEIAIKGRGSQGNIVSKYPVKKILLKTK
GVSTLSGLKIWYDDLLRRLNVDGRGKYLGEFDGDDKILQVHKEGWYELSTFELSNHFDAD
LILIQKFDPEKPFTVVQYEGKAKNYFIKRFVFESIAVGKKGSLISEENGSKFLYLTSNPE
AVLTVDVLKGKTQIPETLEILLAEFIDVKGIKANGNRLTQHEVKNLSISNNEEPELVLES
KNTASDTSSNEVLSDEDTIVETTEEAIIDGREEDLIETEESRIEEQEVAPFTKEEVIKEV
EETPVQEVIEEKPKKTWGKPKAPEKELKEKGPAKDEAKPKPEVNEGQEVKKEAPAKEIKF
EITNPNDIEIDDKGQLGLF
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgagcgacgaaatagaaaacaacataaacgaagaaagtaaacatactgtaatccctatc
aatgggctttatgaaaactggttcctcgattatgcatcttacgtaattcttgatcgcgcg
gttccacacatcaatgatggtttaaagccggttcagcgacgcattatgcactctttaaaa
gagatggatgacgggcgctttaataaagccgctaacgttattgggaataccatgaaatat
cacccacacggtgatgcttctattggtgatgcgatggtacaaatagggcaaaaggaattg
ctgatagattgccagggaaactggggtgatccggtaaccggggatagtgctgcagcagcc
cgttacattgaagcacgtttgtctaaattcgcaaacgaagtagtgtttaatcctgatact
acagcctggcaattgagttatgatggtcgtaataatgaaccgattacattgccggttaaa
tttccgttgcttttagctcagggagcagagggtattgcagtaggtttggctacgaaggtt
atgccgcataattttctggaacttattgatgcatctattgaatcattaaaaggaaacaga
ccaaatattcttcctgatttctttaccggcggtatggccgatttctctgcatataacgaa
ggtatgcgtggaggtaaaatcagggtgagagcaaaaatcacagaaaaggataagaaaaca
cttgtaataactgaaataccatacagtacaacaacgggttctgtaatagatagtgtattg
tctgctaatgataagggcaagatcaagattaaaaaaattgaagacaatacggcacaaaat
gtggagattgtcatccatcttgcgcctggtatctcacctgatgtaaccattgatgcttta
tatgcttttacttcatgcgaagtttcaatttctccaaatacttgtgttattaaggatgat
aaacctcagtttttgagtgtcaacgacattcttattgagaatagccaaaataccaagaat
ctattaaagcaagagctggaaattaagttgcatgaattgcaggaaagaatattctttagc
tcattactaaagatatttattcaggagggcatgtataagaatgctgactatgagaattct
ggtaattttgaaacagttgttgaggtattgaatcttttgtttgagccatttaaacccagt
ctgtacagagagatacttccagaagacttcaaaaagcttattgataaaccgatgagtagt
attacccgctttgatgttaaaaaggcggatgatctgatgaaagctttgacagatgagatc
aaagttgtaaaaaatcaccttaggcatttaactgattacactattgcctggttccagaaa
cttagagataagtatggtaagggtaaagaacgtaaaacggaaatccgcctatttgatagg
gtagaggcatctaaagttgctttggcaaacgtgaaactatatctgaaccgtgaagatggt
tttgttggtactggtttacgtaaggatgaatttgtagctgattgttctgatattgatgaa
atcatcgtattcagagaagatggtaaatgcattatcactaaagtagctgataaaaccttt
gttggtaaaggaattcttcatgctcaggtctttaaaaaaggagatgagcggaccatttac
aatatgatttataaagatggggcaagcggggtttcatacattaagcgatttgcagtagta
ggagtgacccgtgataaggagtatgatctaaccaagggaagtaagggctctaaagtatta
tattttacggcaaaccttaatggcgaagcagaaatagttactgtacaattaaagccacat
accaagcttaaaaagcttcagtttgatctggattttgctgaaatagccattaaagggcgg
ggatcacaagggaatattgtatctaaatatcccgtcaaaaagattcttttaaaaacaaaa
ggagtatcaacactttctggtcttaaaatctggtatgatgatttacttagaaggcttaat
gttgatgggcgaggtaaataccttggcgaatttgatggcgacgataaaatattgcaggtc
cataaagaaggatggtacgaactgagtacttttgaattgagcaatcactttgatgctgat
ctgatcctaattcagaagtttgatcctgaaaaaccatttactgttgtacaatacgaaggg
aaagctaaaaattacttcatcaagagatttgtatttgaatcaattgcagtggggaaaaag
ggtagcctgattagtgaagagaacggttcaaaattcctttacctgaccagtaatcctgaa
gcggtattaacggttgatgtacttaaaggcaaaacacaaattcctgaaactttggaaatt
ctgttggcagagtttattgatgtaaagggaataaaagccaatggaaacaggcttacccag
catgaggtaaagaacctgagcatttctaataatgaagaacccgaattagttttagaaagc
aagaatactgcatcagacacgtcttcgaatgaagtactatccgatgaagatactattgtt
gagacaacggaagaagcaataattgacgggcgagaagaagacctcatagaaacggaagaa
agcagaattgaagaacaggaggtagccccttttacaaaggaggaagtaataaaggaagtt
gaagaaacccctgttcaggaagtaattgaagaaaagcccaaaaagacctggggaaaacct
aaagcaccagaaaaagagctaaaggaaaaaggcccagctaaagatgaggctaaaccaaag
ccagaggttaatgaaggccaggaggtgaaaaaagaggccccggcaaaagaaattaagttt
gagatcactaatcctaatgatatagaaattgacgataagggacagttaggcctattttaa

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