Pedobacter ginsengisoli: CPT03_14665
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Entry
CPT03_14665 CDS
T05145
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_14665
Transporters [BR:
pgs02000
]
Other transporters
Pores ion channels [TC:
1
]
CPT03_14665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
TTR_TEN1-4
Big_1
SBB_T7
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
ATP57624
UniProt:
A0A2D1U7T9
LinkDB
All DBs
Position
complement(3563468..3566671)
Genome browser
AA seq
1067 aa
AA seq
DB search
MKIKQIILAGIPMLCLTGFQSLAHSIDYKKISSGMGSVAFFQTQKIIVTGTVVDENSRPI
PGVGIKSLKTNKSAVTSANGKFSIEVENANEQLTFSYIGYASQTRAAGSGTSPLTIKMVP
AEGVELEDVVVIGYGTSKKSDLTGAVGTVKAEQLQERPASSLNQALTGRISGVQVNTNSG
RPGGRANVRIRGFSSINSSNNPLYVVDGVQLPMGNQAQASQAIDYINPNDIISVEVLKDA
SSTAIYGSRGANGVILVTTKRGKTGESKIEYNVDFSVPTVGPNFPKVLNAKEFLAVEDLA
YKNMEKYDPAGWAAGKYVTRNPALARKDPRLFDSSGNPFFDTNWLEEATQHKLSQNHELG
FSGGNERTTYSFSVGHRNDQGLIKTSFLKRYSGRFSIDDQVKTWLKVGGTLSYTNQNENL
VDQSDQVARSIVEDFPFLPVQYSDGKYADNRDYPNAEGRFNVVHRLNDTKFLLGTQTTLG
SLYSNIKFVEGLEMKTIIGANIISQENNEYSGRTLNISDQGYAAGRTRKEAFWSIENFLT
YNKRFNENHSITGLLGISWQKSNFNNISSEVRGFATDYFEFNNLGAGSLNPQVGSNKSSQ
ALNSYFGRINYSLKDKYLFTATGRADGSSKFGKNNKYAFFPSAAIAWRVSEEDFLKDSKV
ISNLKLRTSFGVTGNSEIPPYSSLSLLSSNFGAVINDVRVVGTGINRLANLDLRWEKTTQ
SDVGVELGMFGGKISLELDLYYRKTTDMLLDAPVPRTSGYVTIRKNIGSMENKGIEAALN
TTNFDSENFTWKTSFNISLNRNKILSLATPADIFGIGGPNFTNPTNIIRVGEAAGSFWGL
TRLGVWSEAERAEAAKFVSYRNGNTILPGDIKYLDVNGDHAINDADRSIIGNGSPDAWGA
LSNNFRYKNLDLTVELQYSVGADVMDMTTHSSEDRQSLANSYATVLNAWTPQNQNTQIAE
IRDTRAGYVTNVDTHWIKDGSFIRGRNVLLGYTFANSVVQKMRLNRLRVYVSAQNLFLIT
SKELQGDPETTPTGGYANDGNNVFSQGMNWHSYPRPTIFMLGLNIGL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaacaaattatcctcgcagggataccaatgctctgtttaacagggttccaa
tccttagcgcattccattgattacaaaaagatcagttccggaatgggcagtgtcgccttc
tttcagacacaaaaaattatagtaacaggaacggttgttgacgaaaactcgcggcccata
cctggtgtagggatcaagtctctcaaaacaaacaaatctgctgttaccagtgccaacggt
aaattcagtattgaagttgaaaatgcaaatgaacagcttacattctcatatatcggctac
gcttcccaaacccgggccgcaggatctggaacttcgccacttacaattaagatggttccg
gcagaaggagtagagctggaagatgttgtggtaattggctatggtacctccaaaaagtct
gatttaacgggtgccgtaggtacagtgaaagctgagcaactacaggagcgtccggcatcg
tctttaaaccaggcattaaccggaagaatatccggggtccaggttaatacgaactcaggg
cgacctggaggaagggcgaatgttagaatacgtggttttagctctatcaattcgtctaat
aatccgttgtatgttgtagatggtgttcagttaccgatgggaaatcaggcccaggcaagt
caggctattgattacatcaaccctaatgacatcatatcggtagaggtgctgaaagatgct
tcctctacagccatttatggttcaagaggagcaaatggcgttattttggttacaaccaaa
cgcggaaaaacaggtgagagtaaaatagagtataatgtggattttagtgtgccaacagta
gggcctaactttccgaaagtattgaatgcaaaggaatttcttgcggttgaggatctggcg
tataaaaatatggagaaatacgatccggccggatgggcagcaggaaaatatgtcaccaga
aatcctgctctggccagaaaagacccaagattatttgatagtagtggcaatccttttttt
gatacaaactggctagaagaagctactcagcataaattgtcgcaaaaccatgaattaggt
tttagcggcggtaatgagcgtactacctactctttctctgtagggcataggaatgatcag
ggacttatcaaaacgtcgtttctgaagcgatattcgggtaggttcagtatagatgatcag
gtaaaaacttggttaaaggtaggcggtactttaagctataccaatcagaacgaaaacctt
gtggatcaaagtgatcaggtagcacgtagtattgttgaagatttcccgttcctaccagta
caatatagcgacggtaaatatgccgacaacagagactacccaaatgctgagggacggttt
aatgtggtacataggctaaatgataccaagtttttactaggtactcaaacaacgcttgga
agtttgtattcgaatatcaaatttgttgaaggactggaaatgaagactataataggcgcc
aatatcatttcacaggaaaataatgaatacagcggtcgtacattaaatatttcagatcag
ggctatgcggcagggcgtaccagaaaagaggctttctggtctatagagaactttctgacc
tacaataagcgattcaacgaaaaccattcaattactggtttattaggtatttcatggcag
aaaagtaattttaataacatcagctcagaagtaaggggctttgcaacagattattttgaa
tttaataacctgggggcaggtagtctaaatccacaggttggctctaataaatcaagtcag
gcacttaattcgtatttcggaaggattaattatagcctgaaggataaatacttatttacc
gctacgggaagggcagatggttcatcgaaatttgggaaaaataataagtatgcctttttc
ccttctgcagcaatagcatggagagtttctgaagaagactttttaaaagatagtaaagta
atatctaatttaaaactccgcaccagttttggtgttacaggtaactctgaaatacctccg
tattcttcgctatcactgcttagttcaaactttggagcggttattaacgatgtaagggta
gttggaacagggataaatagacttgctaatttagatctgcgttgggaaaaaacaacacaa
agtgatgttggtgttgaactgggtatgtttggtggcaaaatatcattggagctggatctt
tattacagaaaaactactgatatgttgctggatgctcctgttccgcgtacaagtggttac
gttaccattagaaaaaatattgggtcaatggaaaataagggtatagaggcagccttgaat
accacaaattttgattcagagaactttacatggaaaacctcatttaacatatcactgaat
agaaataagatcctttctctggctacaccggcagatatattcgggataggtggccctaat
tttactaatccaactaacattatccgtgttggagaggctgctggttctttctgggggctt
acccgcttgggtgtttggtctgaggcagaaagggcagaggctgccaaatttgtgagctat
agaaatggaaatacaatacttccgggcgacattaagtatctggatgtaaatggagaccat
gctataaatgatgccgataggtcaataattggtaatggtagtcctgatgcatggggtgca
ttatctaataatttccgctataagaacctggaccttacagttgaacttcagtattctgtt
ggtgccgatgtaatggatatgaccacgcactctagtgaagaccgacaatcgctagccaac
agttacgcgacagtactaaatgcatggactcctcaaaatcaaaatacgcagattgctgaa
attcgtgatacgcgtgcaggttatgtaactaatgttgatacccactggatcaaagatggt
tcatttattcgtggcaggaatgtattgcttggctataccttcgccaattcagtagtgcaa
aaaatgaggttaaacagattaagggtctatgtatctgcacagaatcttttccttatcacc
agcaaagagttgcagggtgatcctgaaactacacctacaggtggatatgcaaatgatgga
aacaacgtgttctcgcagggaatgaactggcatagttatcctcgaccaacaatttttatg
ctgggtttaaatattgggctataa
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