Pedobacter ginsengisoli: CPT03_14830
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Entry
CPT03_14830 CDS
T05145
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CPT03_14830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgs03021
]
CPT03_14830
Transcription machinery [BR:
pgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPT03_14830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ATP57654
UniProt:
A0A2D1U7W6
LinkDB
All DBs
Position
complement(3604557..3605417)
Genome browser
AA seq
286 aa
AA seq
DB search
MREIKIEKSFTKRDHDSLRRYLNDIAGYPLLSAEEEVKLARKIQTGDLAALQRLVTSNLR
FVVSVAKKYEGQGLPLADLISEGNAGLVKAAERFDESRGFKFISFAVWWIRQSMMMAIGT
YKRMIRLPMNQVNDIQDLWRSEMEMEQKLERLPTDEELSEYTGIALDKLKAYQYSPGHAV
SLDTGGDDEEKPGLMVFLEDTSIDAPDTVLQSQDLKYSLRELLNQLPDRQRRIIQLSFGL
QGNEAMHLEDIADLFDLSKESVRKIKYQALHSLGKEKGAKRLRQYL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatcaagatagaaaaatcctttactaaacgcgaccatgattcccttaggaga
tatctgaatgatattgccgggtatccgttgttaagtgcggaagaggaggttaagctggcc
cgtaaaattcagacgggagaccttgctgccttgcaaaggcttgtaacttcaaaccttcga
tttgtagtttcagttgcaaaaaagtacgaaggacagggtttgcctcttgcagatctgatt
tcggaaggaaatgcaggattggttaaggcagcggagcgctttgatgaaagccggggattt
aagtttatctcatttgcggtatggtggatcagacagtccatgatgatggcaattggcaca
tataaacgtatgatcaggcttccgatgaatcaggttaatgatatacaggatttgtggcga
tcggaaatggagatggagcagaaattggaacgcttacctacagacgaggagctatctgag
tataccggaattgcacttgataagctaaaggcctatcagtacagtccggggcatgcagtt
tctttggatacagggggtgatgatgaagagaagcctggtctgatggtgtttcttgaagat
acttcgatagatgcgcctgatacggtactccaatctcaggatttaaagtacagccttagg
gaattgttaaatcagcttccagacagacagcgccgaatcattcaactcagcttcggatta
caaggtaatgaggcaatgcacctggaagacattgcagatctttttgacttgagcaaagaa
agtgtgcggaagattaaatatcaggcactgcatagccttggtaaagagaagggggcgaaa
cgcctcagacaatatttgtaa
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