Pedobacter ginsengisoli: CPT03_15840
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Entry
CPT03_15840 CDS
T05145
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_15840
Enzymes [BR:
pgs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CPT03_15840
DNA repair and recombination proteins [BR:
pgs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CPT03_15840
Prokaryotic type
CPT03_15840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4874
Terpene_synth_C
Motif
Other DBs
NCBI-ProteinID:
ATP57828
UniProt:
A0A2D1U887
LinkDB
All DBs
Position
3834961..3836265
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AA seq
434 aa
AA seq
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MEKEISICWIRRDLRLNDNAALYAALKAQYPVLILFIFDTKILSKLPNQHDSRVTFIHQT
LEEIHSMLTKHKSTIAIKHGTPEKVWGEILKTYNVKAVYTNHDYEPDAIKRDDALAEYLA
SEQIEFKTLKDQVIFEKNEILKADGKPYTVFTPYFNQWQSKLNEFYTKSYPSNNYFNNLL
KIAPLPIPTLADIGFKESPQKFPTKTFNKKLTDYEDKRDFPALDATTQIGMHLRFGTISI
REAASQAIKQNARKWLSELAWRDFYMMILWHFPRIVHQSFKPAYDNIKWRNNESEFEAWC
NGKTGYPLVDAGMRQLNQTGYMHNRVRMVVASFLTKHLLIDWRLGEAYFAEKLLDYEMAS
NIGGWQWSCGCGNDAAPYFRVFNPELQAKKFDPDQAYVNKWLPEYKQQKHVQPIVEHAFA
RERVLKVFKEALNE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagaaataagcatctgctggatcagacgagatttaagattaaatgataatgcc
gctctttatgcagcgctaaaagcacaatatccggtgcttatccttttcatatttgacaca
aaaatcctcagtaaacttccaaaccagcacgactccagggtcacctttatacatcaaaca
ttagaggaaatccactcaatgctaacaaaacataaatctaccatagccattaaacacggc
acacctgaaaaggtatggggtgagattttaaaaacatacaatgtaaaagctgtttatacc
aaccatgattacgaacctgatgccattaaaagagacgatgcactggcagaatatcttgca
tctgagcagattgaattcaaaacactaaaagatcaggtaatatttgaaaagaacgaaatc
ttaaaagccgatggcaagccttataccgtttttacgccctactttaaccaatggcaatca
aaacttaatgagttttacacaaagtcatatccttcaaataattacttcaataaccttctt
aaaattgcacctctgccaatacctacattggcagatataggttttaaagaatcacctcaa
aaattcccgacaaagaccttcaacaagaaacttactgactatgaagacaagagagacttt
cccgctctcgacgctaccacacagattggcatgcaccttcgttttggcacaattagtatc
cgtgaagcagccagtcaggcaataaaacaaaatgcccgcaagtggttatctgaattggca
tggagagatttttacatgatgatactctggcacttcccaagaattgttcatcaatctttt
aaaccggcatacgataatataaagtggcggaacaatgaatcagagttcgaggcctggtgt
aacggaaaaacaggctatccattggtagatgcaggcatgagacaactcaatcaaaccgga
tatatgcacaacagagtgcgaatggttgtagcctcctttttaactaagcacctgctaata
gactggcgcttgggtgaagcctatttcgcagagaagttattagattatgaaatggccagt
aatattggaggctggcaatggtcatgtggctgcggaaacgatgctgctccctacttccgg
gtatttaaccccgagctgcaagccaaaaagtttgatccagatcaggcttacgttaacaaa
tggctacccgagtataaacaacaaaagcatgtacaacctatagttgaacatgcttttgca
agagaaagggtattaaaagtttttaaggaggccttaaatgaataa
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