Pedobacter ginsengisoli: CPT03_15865
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Entry
CPT03_15865 CDS
T05145
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00071
Fatty acid degradation
pgs00362
Benzoate degradation
pgs00650
Butanoate metabolism
pgs01100
Metabolic pathways
pgs01120
Microbial metabolism in diverse environments
pgs01200
Carbon metabolism
pgs01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CPT03_15865
09103 Lipid metabolism
00071 Fatty acid degradation
CPT03_15865
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CPT03_15865
Enzymes [BR:
pgs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CPT03_15865
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Pyr_redox_2
NAD_binding_2
Pyr_redox
NAD_Gly3P_dh_N
ApbA
UDPG_MGDP_dh_N
DAO
Motif
Other DBs
NCBI-ProteinID:
ATP59276
UniProt:
A0A2D1UCG0
LinkDB
All DBs
Position
complement(3840846..3843209)
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AA seq
787 aa
AA seq
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MINKKINKVAVLGSGIMGSRIACHFANIGVEVLLLDIVPKEGPRNGIVDAALQTAVKTNP
SPVYSKKVLSKITTGNFDDDMSKIAGCDWIIEVVVENLDIKKKVFEQVEQHRKAGTLVTS
NTSGIPIHMMAEGRSDDFRANFCGTHFFNPPRYLRLLEIIPTPHTKPELVDFLMYYGDKF
LGKTTVLCKDTPAFIANRVGVYSIMALLHLVEKMELTVEEVDKYTGPALGRPKSATFRTT
DVVGLDTMIKVAKGLYDNCPDDKAHDLFKLPAYVEKMEANKWLGDKTNQGFYKKTKTAEG
KTEILALDLKTLEYRPQVKVKSATLDLTKPIENVRDRMKVFAAGKDKAGELFRASFFGLF
EYVSDRIPEISDELYRIDDAMRAGFGWDLGPFEVWDAVGVAESIEGMKKYGHEAAAWVHE
MLAAGNTSFYKVEDGVRKYYDIPTKSYKAVQGAEAFIILDNLRANKVIWKNSGASIIDLG
DGIINVEFHSKMNTIGGDTLQAINKAIDMAEKDYRGVVIGNDGANFSAGANVGMIFMMAV
EQEWDELNMAIRMFQNTSMRIRYSSIPVVVAPHNLTLGGGCEFSLHADHVQLNAETYMGL
VEFGVGVIPGGGGTKEFALRASDEYNDDQIVQNVLKDRFLTIGMAKVSTSAAEAFELGYL
QKGKYSISMNRSRLIADAKAKAIELADAGYTKSVQRKDIKVLGKQGLGIVYAGANTMYSG
HYISEHDKKISEKLGWVMCGGDLSSPTEVTEQYLLDLEREVFLSLCGERKTLERIQSIVT
KGKPLRN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaaaaagataaataaggttgcggtattgggatctggtattatgggatcgcgt
attgcctgtcactttgcaaatataggtgttgaggtcttgttgttagatattgtgccaaaa
gaggggcctagaaatggtatagttgatgcagcattgcaaacagctgtgaaaactaatccc
tcgccagtttattcaaaaaaagtacttagcaaaattactaccggtaattttgatgatgat
atgtcgaaaattgcaggctgcgattggattattgaggttgttgtagagaatctggatata
aagaaaaaggtatttgagcaggttgaacaacaccgtaaagcaggtactttggttacttca
aatacatctggtattcctattcatatgatggcagagggtagaagtgatgattttagggct
aatttctgcggtacgcatttttttaatccaccacgttatttaaggttacttgaaattatt
cctacgccgcatactaagccggaactggttgattttctgatgtattatggcgataagttt
ttaggtaaaacgactgttttatgtaaagatacgcctgcgttcattgcaaacagggttggg
gtgtattctattatggcgctattacatctagttgaaaagatggagcttacggtagaggaa
gtggataaatataccggtccggccttgggccgaccaaaatcggcaactttccgtactact
gatgtggttgggttagataccatgattaaggttgcaaaaggactttatgataattgcccg
gatgataaggcacatgatctttttaaacttccggcatatgtagaaaagatggaagccaac
aaatggcttggtgataaaaccaaccagggtttctataaaaaaacaaaaactgctgagggc
aaaacagaaattcttgcactcgatttaaaaacactggaatacagaccgcaggtaaaggtt
aagtcggccacgctggatttgaccaagccgattgagaacgtaagagacaggatgaaggta
tttgctgctggaaaagacaaagcgggcgagctttttagggcttcgttttttggtctgttc
gagtatgtatctgacaggattcctgagatttctgatgagctatatagaattgatgatgcc
atgcgggctggttttggatgggatttgggaccgtttgaagtttgggatgctgtgggtgtt
gcagaatctattgaaggcatgaaaaaatatggacatgaggctgcggcctgggttcatgaa
atgcttgctgcgggcaatacttcgttttacaaggtagaggatggtgtgcgtaaatattat
gatatccctactaaaagctataaagcggtacagggtgctgaggcatttattattcttgat
aatttaagggccaataaggtgatctggaaaaactccggtgcatctattattgatcttggc
gatggcattattaacgtagagtttcattctaaaatgaataccattggtggtgatacttta
caggctattaataaggctattgatatggcagagaaggattacagaggggtggttattggt
aatgatggtgcaaacttctcggcaggtgccaatgtagggatgatctttatgatggcggtt
gagcaggaatgggatgaattgaatatggctataaggatgtttcagaatacttctatgcgc
atcaggtattcatctattccggtggttgttgctccacataaccttacgcttggtgggggc
tgtgagtttagcttacatgcagatcatgtgcagctgaatgccgaaacctatatgggtttg
gttgagtttggtgtaggggttattcctggtggtggtggtaccaaagagtttgctttaagg
gcttctgatgagtacaatgacgatcagattgttcaaaatgtgcttaaggataggttttta
actattggtatggctaaggtttctacttcggctgctgaggcatttgaattgggttatttg
caaaaaggtaaatattctatttctatgaaccgcagcagacttattgccgatgccaaggct
aaagcaattgaacttgcagatgcaggttataccaagtcggttcagcgtaaggatattaaa
gttttgggtaaacagggcttgggtattgtttatgcaggtgctaataccatgtattcgggc
cattatatttctgagcacgataaaaagatctctgaaaaattaggctgggtaatgtgtgga
ggtgatctttcatcgcctacggaagtaaccgagcaatatttgctggatttggaaagggaa
gtgtttttatcgctctgcggtgaaaggaaaacgcttgaacgtatccaaagcattgtaact
aaaggtaagccgttaaggaattaa
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