Pedobacter ginsengisoli: CPT03_15875
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Entry
CPT03_15875 CDS
T05145
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_15875
Transporters [BR:
pgs02000
]
Other transporters
Pores ion channels [TC:
1
]
CPT03_15875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF6089
OMP_b-brl
TSP_3
DUF1598
DivIC
Motif
Other DBs
NCBI-ProteinID:
ATP57833
UniProt:
A0A2D1U891
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All DBs
Position
complement(3843845..3845179)
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AA seq
444 aa
AA seq
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MKLRLFKCLPLAVAGLFIGGAVQAQDSTRVTSGDANKLNTWSIGINGGALAPISPLGGKN
DFSNWKSNFGYGLYIKKQITPYFSLRLDGVRGKLTGDNSEPYKSGAVNESPFSAFETKLD
YSASLNAVVNLFNIDMFNKNNALQLYASAGAGVAGYKVKTATAGGTLTDYKNGETLNELV
IPVGVGAKFKLSDRINLDLGWTMNYLDNDDLDGYYRGSNDKYSYAYGGLEFALGSGQKQL
AWHNPVALTYDEALQAKQTANALKGDLEAQKAENQKLRGEMNDLLKDTDGDGVADKLDKC
PGTPAGTVVDGSGCPLKVPAPIEKVVITEADRKVVADAIKNLEFDLGKATIRAKSYATLN
RVAALLVEKNFSLKLAGHTDNTGSDALNMRLSKARAESVKAYLTSQGANASRIEATGYGE
SQPIASNKTASGRQQNRRVEFTLY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaagattatttaaatgtttaccattagccgttgcaggcctttttataggtggt
gcagttcaggctcaggattcaacacgggttacaagtggcgatgcaaataagttaaatacg
tggtctattggtataaatggcggtgcattagctccaatttctccgttaggtggaaaaaat
gatttctcgaactggaaaagtaatttcggctacggattatacattaaaaagcaaattaca
ccatatttctcattgcgtttagatggggtaaggggtaagttaaccggcgataattctgaa
ccatataaaagtggtgcagtaaacgagagtccgtttagtgcttttgaaaccaagttggat
tattcagcaagtttaaatgctgtagtgaatttgtttaatattgatatgttcaataaaaac
aatgcattgcagttgtatgcatcggcaggtgctggtgttgcaggttataaagttaaaact
gctacagcaggtggtactttgaccgactataaaaatggcgaaacacttaatgaactggtt
attccggttggtgtaggtgctaagtttaaactatcggacaggataaaccttgatctgggc
tggacaatgaactatcttgataatgatgatcttgatggttactatcgcggaagcaatgat
aaatactcgtatgcttatggtggtttagaatttgctttgggtagcggacaaaaacagctt
gcatggcataatcctgtagctttaacttatgatgaggctttacaggctaaacaaactgcc
aatgctttaaaaggtgatttggaagctcagaaagctgagaaccaaaagctaagaggcgaa
atgaacgatttgctgaaagatacagatggcgatggtgttgctgataaactggataaatgt
ccgggtacgcctgcaggaactgttgttgatggatctggatgtccgctaaaagtacctgct
ccgattgaaaaagtagtgataactgaagctgaccgtaaggttgttgctgatgcgattaaa
aacttagagtttgatttgggtaaagctaccatcagggcaaaatcttatgctacattgaat
cgcgttgcggcgctgttggttgagaaaaactttagcttaaaattagcaggtcatactgat
aatacaggatctgatgcgttgaatatgaggttgtctaaagccagagcagaatctgtgaaa
gcttatttaacatcgcaaggagccaatgcttcgcgtatagaggcaacaggatatggcgag
agccagcctattgcatcaaataaaactgcatcgggccgtcaacaaaacagaagggtagag
tttacgctttactag
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