Pedobacter ginsengisoli: CPT03_15885
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Entry
CPT03_15885 CDS
T05145
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00061
Fatty acid biosynthesis
pgs00071
Fatty acid degradation
pgs01100
Metabolic pathways
pgs01212
Fatty acid metabolism
pgs02024
Quorum sensing
pgs04146
Peroxisome
Module
pgs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CPT03_15885
00071 Fatty acid degradation
CPT03_15885
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CPT03_15885
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPT03_15885
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgs01004
]
CPT03_15885
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgs04147
]
CPT03_15885
Enzymes [BR:
pgs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CPT03_15885
Lipid biosynthesis proteins [BR:
pgs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CPT03_15885
Exosome [BR:
pgs04147
]
Exosomal proteins
Exosomal proteins of breast milk
CPT03_15885
Exosomal proteins of breast cancer cells
CPT03_15885
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ATP59277
UniProt:
A0A2D1UCE7
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All DBs
Position
complement(3846982..3848766)
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AA seq
594 aa
AA seq
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MAVTITRVFDLLQYNLEKFPKEEFVSGKINGQWVKYSTQKFCDTVDALSRGLIGIGIEKE
SRVAVISHNRPEWNIADFAIMQIGAYQIPLYPTLAEHDIKFILENAAVTVVFAADETLYK
KLKNVCAELKSAIKVYTFNEVSGAENWSVLLADGIKQFQINLDEYRAQIKADDILTLIYT
SGTTGTPKGVMLTHDNLVKNFQNSAVLLPDGIRTGLSFLPLSHIFERMVVYLYMFTNTGV
YYAESMDTIVADIQFVKPTVFSTVPRLLEKVYEKIMEKGKALTGVKRGIFFWSVTLAEKF
EIESGWFYNLKLGIARKLVFKKWQEALGGNIIVIISGGAALNPRLARIFWAAGMPVFEGY
GLTETSPVITVNHFGNTMFGTVGPAIEGVEVKIAEDGEVLARGHDIMKGYYMRDDLTAET
IDKDGWFHTGDIGELVNGRFLKITDRKKEIFKTAGGKYVAPQMIENKFKETPLVEQVMVL
GENRKFPSALIVPNFVALKVWAEKKGIGYTTDAEMVKDPNVLEKFQQIVVLSGKDFGKWE
QVKRFALLAKQWTIDGGELTPKLSLKRKIILEKNKDIIDKIYVDAENYKEEKHE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaacgataacaagagtattcgacttgcttcaatacaatttagagaaatttcca
aaggaagaatttgttagtggtaaaataaacgggcaatgggtaaaatacagtactcaaaag
ttttgtgatacggttgatgcgctgagccgtgggcttattggaataggtattgaaaaagaa
tccagagtggcggtaatttcacataacaggccagaatggaatattgccgattttgccatc
atgcagataggtgcttatcagataccgctttatccaacacttgcagagcacgatattaag
tttatcctcgaaaatgcagctgttaccgtggtatttgcggctgatgaaacgctttataaa
aaactaaaaaatgtatgtgccgaactgaaatcagccattaaggtatatacatttaatgag
gtttctggagccgagaactggtctgtattactggccgatggtataaagcagtttcagata
aatctggacgaataccgagcgcaaataaaggccgacgatattttaactcttatatatact
tcgggaacaaccggaacgcctaaaggggttatgcttacgcatgataatctggttaaaaat
ttccagaattcggcagtgcttttaccagatggaataagaacagggcttagctttttacca
ctgtctcatatttttgagcgcatggttgtgtacctgtatatgtttacaaatactggtgtt
tattatgctgaaagcatggatactattgtggccgatattcagtttgtaaaacctacggtt
ttttcgacagttccgcggttgttggaaaaggtttatgagaaaatcatggaaaaaggcaag
gcgcttaccggtgttaaaagagggattttcttttggtcggtaacgttggcagagaagttt
gaaattgaaagcggctggttctataatttaaaactaggcattgcccgaaaactggtattt
aaaaaatggcaggaagccctgggcggcaatatcattgttattatttcgggcggggcagct
ttaaatccgcggttagcaagaatcttttgggcggcaggtatgccggtgtttgaaggttat
ggattaacagaaacatcgccggtaattacagtaaaccattttggtaataccatgtttggt
actgtagggcctgcaattgaaggggtagaggtaaagattgccgaagatggagaggttttg
gcgcgtggccacgatattatgaagggctactatatgcgcgatgaccttactgccgaaacc
atagataaggatggctggttccataccggcgatattggcgagctggtaaatggcaggttt
ttgaaaattactgatcgtaaaaaagagatatttaaaactgcaggcggtaagtatgtggcg
cctcaaatgatagaaaataaatttaaagaaacaccattggtggaacaggttatggtactt
ggcgaaaatcgtaagtttccatcggctttaattgttcctaattttgttgctttaaaagtc
tgggccgagaaaaagggaatagggtataccaccgatgctgaaatggtgaaggacccgaat
gtgttagaaaaatttcagcagattgtggtgttatcgggtaaggattttggtaaatgggag
caggttaaacgcttcgctctgttggccaaacagtggactattgatggtggcgagcttacg
cctaaacttagtttgaaacgtaagattattctggaaaagaataaagatattattgataag
atttatgtcgacgcagagaactataaagaagagaaacacgaataa
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