Pedobacter ginsengisoli: CPT03_16250
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Entry
CPT03_16250 CDS
T05145
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00052
Galactose metabolism
pgs00511
Other glycan degradation
pgs00600
Sphingolipid metabolism
pgs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CPT03_16250
09103 Lipid metabolism
00600 Sphingolipid metabolism
CPT03_16250
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CPT03_16250
Enzymes [BR:
pgs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
CPT03_16250
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Glyco_hydro_2
DUF4982
Glyco_hydro_2_N2
TcaA_3rd_4th
Motif
Other DBs
NCBI-ProteinID:
ATP57898
UniProt:
A0A2D1U8G8
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All DBs
Position
3953836..3955893
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AA seq
685 aa
AA seq
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MRNRNTIVLLILFLLNAPPAEAALTHARETNRIIIPLNNGWQFYFAYNFETNIKKDLVNL
PHTWNAAEVLNGVADYKRTSAVYENKLNVADNWKGKRLFLYFEGTNSVATLLINNKFVTD
HQGGYTAFCAEITNFITPGENSITVQVSNAYRQDVIPLHGDFNVYGGIHRPVSLIITNQN
CISPLDYGSPGIYIKQKNLSAQSANIEVLSKLSILNRKSLRLKTIIYDKDKKPVSSVITK
INSENELKQDLHINKPHLWEGKASPYLYAVEVSLLQDEVTIDKIVQPLGLRSFLVEPNKG
FFLNGKYLNLYGVGRHEDVSGRGSALTIEDQYRDMSLIQELGATSVRLTHYPQNKLFYNL
SDSAGLILWTEIPFVGPGGYNGTGYIKNEKLEANIRKTLREMIRQNYNHPSIFFWGLFNE
LKLNYDNPQPFINELNVLAKKEDPDRLTTLASNLGSDTFTDLSDLMGWNQYFGWYDGVFE
QVGTWADEIHRALPNKPISVSEYGAGASPFKHTEELQKPVPKGRFHPEEWQTAFHEKHWA
EFKKRPYIWGKYVWVLADFGSSIRTEGDQDAINDKGLLTYDRKIKKDAFYFYKANWNPEP
VLYISERRNTKRTKSLTSIKVFSNGKKTELLVNGKSYGKKEKNELNTIVWDNIPLQEGKN
KIVVKSQIKGKWLQDRCEWYLTTAT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacagaaatactattgttttacttatcctttttttattgaatgctccacctgca
gaagctgctttgactcatgccagagaaacaaacagaattatcataccattgaacaatggc
tggcaattctatttcgcctataacttcgaaacaaatattaaaaaagatttggttaattta
ccacatacctggaatgctgccgaggttttaaatggtgtggcggattataaaagaacttca
gcagtttatgaaaataagcttaatgttgcagacaactggaaaggaaaacgccttttcctt
tattttgagggaacgaacagtgtagcaaccttattgataaataataagtttgtaactgat
catcagggaggctatactgcattttgtgctgaaataacgaattttattacccctggagaa
aattctataactgtgcaggtaagtaatgcttacaggcaggatgtaataccattacatggc
gattttaatgtatatggaggtatacatcgtccagtctctttaattattaccaatcaaaat
tgcattagccccttagattacggtagtccgggcatatatatcaagcaaaaaaatctatct
gcccaatccgcaaacatcgaagtcttaagtaagctatcaatattaaatagaaagagccta
aggctcaaaactatcatttatgataaggataaaaaacccgtatcatctgtaattaccaaa
attaattcagaaaatgagttgaaacaagacctacacataaataaaccgcacttatgggaa
gggaaagcttccccctacctttacgccgtagaggtaagcctgctacaagatgaggtgacc
attgacaagatagttcaacccctgggattacgcagtttccttgttgaaccaaataaaggg
ttttttcttaatggaaaatatctcaatctatatggtgttggtcgacatgaggatgtttcc
ggtcggggatctgcgctgactattgaggaccaatatagagacatgagccttattcaagaa
ctcggagcaacttcggttcgtttaacacattatccccagaataagcttttttataaccta
agtgacagtgccggccttattttgtggacggagatcccctttgttggccccggtggatat
aatggaaccgggtacataaaaaatgaaaaactagaagcaaacataagaaaaacacttagg
gagatgatcaggcaaaattataatcatccttcaatatttttctggggcctgtttaatgag
ctaaaactaaattacgataaccctcagccttttatcaacgaattaaatgtacttgcaaaa
aaagaggacccagaccgcttaacaacattggcatcaaacctaggtagtgatacatttaca
gacttaagtgatttgatgggctggaaccaatattttggctggtatgatggggtttttgag
caggtaggaacatgggcagatgaaatacatcgggccctgccaaacaaaccaatatcagtc
agcgaatatggagccggagcaagcccctttaaacatactgaagagctccaaaagccagtt
ccgaaaggaagatttcatcctgaagaatggcagactgcctttcatgaaaaacactgggca
gagttcaaaaagcgcccatatatatggggaaaatatgtttgggtactggctgatttcggg
tcatcaatacggacagaaggagaccaagatgcgattaacgataaaggactgctgacttac
gacagaaagataaaaaaggatgctttttatttttataaagcaaactggaaccctgagcca
gtactgtacatttcagagcgcaggaacaccaagcgcaccaaatctctgacgagtataaag
gttttttccaatgggaaaaaaacagaattactggttaatggaaagagttatggcaaaaaa
gaaaagaatgagctcaatactattgtgtgggataacataccactgcaggaaggaaaaaat
aagatcgtagtaaaatctcaaataaagggaaagtggctgcaagacaggtgtgaatggtat
ttaacaactgcgacataa
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