Pedobacter ginsengisoli: CPT03_16290
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Entry
CPT03_16290 CDS
T05145
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPT03_16290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_16290
DNA repair and recombination proteins [BR:
pgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPT03_16290
RecFOR pathway proteins
CPT03_16290
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GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
AEP-TOTE
UBA_7
Motif
Other DBs
NCBI-ProteinID:
ATP57906
UniProt:
A0A2D1U8I1
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All DBs
Position
complement(3968027..3968611)
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AA seq
194 aa
AA seq
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MFAYIDGKLTFKCPAYIVVEAGGVGYHINISLNTYSSLADTERCKIYTWLHVKEDAHTLY
GFADEGERRLFLHLISVSGIGPNTGRMMLSSITPNEIQAAIISGDLPLIQRIKGIGAKSA
QRLVLELQDKLKKEGTGSLIAAPLNNTVKEEALSALMMLGFAKPASEKAIDGAVKVGGQD
LSVEQMIKLALKNL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcatatattgatggtaagttaacctttaaatgccctgcgtatattgtagtggaa
gccgggggtgttggctaccatattaatatatctctaaatacctacagtagccttgctgat
actgagcgttgtaaaatctatacctggcttcacgttaaggaggatgcccatacactttat
ggctttgccgatgaaggtgaaagaagattgtttctgcacctgatttcggtatcaggcata
gggccaaatacgggaaggatgatgctttcgtctattactcccaatgaaattcaggcggct
attattagcggagacctgccacttatacaacgtataaaaggaataggtgcaaagtctgca
cagagacttgttcttgaactgcaggacaaactaaagaaagaaggaacggggtcgttaatt
gcggcccctttaaacaataccgtaaaggaagaagctttatcagctttaatgatgcttggt
tttgcaaaacctgcctcagaaaaagcaattgatggcgcagtgaaggtgggtggtcaggat
ttatcagtagaacaaatgattaaactagccctgaagaatttataa
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