Pedobacter ginsengisoli: CPT03_16810
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Entry
CPT03_16810 CDS
T05145
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00051
Fructose and mannose metabolism
pgs00541
Biosynthesis of various nucleotide sugars
pgs01100
Metabolic pathways
pgs01250
Biosynthesis of nucleotide sugars
Module
pgs_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
CPT03_16810 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CPT03_16810 (gmd)
Enzymes [BR:
pgs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
CPT03_16810 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
adh_short
Big_4
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
ATP58008
UniProt:
A0A2D1U8R9
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All DBs
Position
complement(4089027..4090163)
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AA seq
378 aa
AA seq
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MKIALITGVTGQDGAYLAEFLLKKGYFVHGLKRRSSSFNTERIDHLYQDQHENNVNFKLH
YGDLTDSTNLIRIVQEIQPDEIYNLAAMSHVKVSFESPEYTANADGVGTLRLLEAVRILG
LTKKTKVYQASTSELYGLVQAVPQSETTPFYPRSPYAVAKMYAYWITVNYREAYDMFACN
GILFNHESPVRGETFVTRKITRAACKIALGLQNCLYLGNLSAQRDWGHAKDYIEAMWLIL
QQEKPEDYVIATGVTTTVRDFVKMSFAELGIEIEFSGKDQYERGVIIDIDQDLVAQLGLN
DEYLKPGTVVVQVDEKYFRPTEVDLLLGDPTKANTKLGWKPKYDLPLLVKDMVHSDLHLM
KKDEYLKQGGFKTLNYFE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgccttaattacgggagtaacgggacaggatggagcctatttagctgaattt
ttgttaaaaaagggatattttgttcacggactgaaaagaaggtcgtcatcttttaataca
gagcgtatagatcacctttaccaggatcagcacgaaaataatgtaaacttcaaattacat
tatggcgatttaactgattcaaccaatctaatccgtattgttcaggaaattcagcccgat
gagatttataaccttgcggcaatgagccatgttaaggtaagtttcgaatctccggaatat
actgcaaatgccgatggtgttggaacgctaaggttattagaagcggtgcgcatattaggt
cttaccaaaaaaaccaaggtataccaggcctctacctccgagttatacggattggttcag
gctgtacctcaaagtgaaactactcctttctacccaaggtcgccatatgcagtagcaaaa
atgtatgcttactggattacggtaaactacagagaggcttatgatatgtttgcctgcaac
ggtattttgtttaatcacgaaagtccggttcgaggcgaaacctttgttacccgtaaaatc
acacgtgcagcatgtaaaatagcattgggcttacagaactgtctgtaccttggtaaccta
tcagcacaacgcgattggggacatgcaaaagattatatcgaagccatgtggttaattctg
caacaggaaaaaccggaagactatgtgattgccaccggcgttaccactacagtcagggat
tttgttaaaatgagttttgccgaattgggaattgaaatcgaatttagtggaaaagaccaa
tatgagcgcggcgtaattattgatattgaccaggatttggttgcgcagctcggattaaat
gatgagtatttaaaaccaggtactgttgtggtgcaggttgatgaaaagtatttcaggcca
acagaggttgatctgttacttggcgacccaaccaaggccaatacaaaattaggctggaaa
cctaaatatgatcttccccttttagtaaaagatatggttcattcagatctgcatttgatg
aaaaaggatgagtacttaaaacagggcggatttaaaacattgaactatttcgaataa
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