Pedobacter ginsengisoli: CPT03_17000
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Entry
CPT03_17000 CDS
T05145
Name
(GenBank) general secretion pathway protein GspF
KO
K02653
type IV pilus assembly protein PilC
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgs02044
]
CPT03_17000
02035 Bacterial motility proteins [BR:
pgs02035
]
CPT03_17000
Secretion system [BR:
pgs02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CPT03_17000
Bacterial motility proteins [BR:
pgs02035
]
Pilus system
Pilus assembly proteins
CPT03_17000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF3852
Motif
Other DBs
NCBI-ProteinID:
ATP58043
UniProt:
A0A2D1U8U8
LinkDB
All DBs
Position
complement(4130467..4131609)
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AA seq
380 aa
AA seq
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MSSIDISRYQKKKQQPKGKQEGKDIFAFLNKEISFGGKQVSDKKKEGLYVELSTLLLSGI
DLRTALELILVDQEQAKDKALFEGIRQRILAGLALSEALKETERFSDYEYYSIRIGEETG
KLGEVLTDLAKYYKSKIQQRRKIVSAVTYPAIVLLSSLGAVFFMIKFVVPMFADVFLRFG
GKLPWITAAIISFSGWFDRYFIFLILFFAGLFVLYFLKRKSGWFRDFSSNLLLRIPVVGD
LVKKIYLARFANTMRLLVSTDTPLLRSIALVRQMINYYPIETSLLKVEQDILHGESLHKS
LSAFSFYPAKMIQLIKVGEEVNRMDYFFEKIATQYTEEVEYKTNTISSLLEPLIIIFLGL
VVGIILIAMYLPMFQMSNSF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatagatatatcccggtatcagaaaaagaagcagcagccaaaaggcaagcag
gagggtaaggatatttttgctttcttaaataaggagatcagttttggaggcaagcaggtt
tctgataaaaagaaagagggattgtatgttgagttgagtacattactgctgtccggcatc
gatttaagaacagctctggaactgatccttgttgatcaggaacaggcaaaagataaagca
ttatttgagggtataaggcaaagaatcctcgccggactggccttatcagaggctttaaag
gaaacggagcggtttagtgattacgaatattacagcattcgaataggagaagaaacaggt
aaacttggtgaagtattgacggatctggctaagtattacaagagtaagattcagcagcgc
cgaaaaattgtgagtgcagttacttatcctgcaatagttttgctttcttcgttgggtgct
gtattctttatgatcaagtttgtggttcccatgtttgctgatgtttttttaaggtttgga
gggaagctcccatggatcactgctgctataattagcttttcgggatggtttgataggtat
tttatctttttaatactattttttgcgggtttgtttgtgctatacttccttaagcgtaaa
tctggttggttcagggatttttcttcaaatttgctgttaagaatacctgttgttggggat
ttggttaagaaaatatatctggcccgttttgcaaataccatgcgcttactggttagtaca
gatacgcctttgctacgttcaatagctttagtaaggcaaatgattaactattacccaatt
gaaacttcgcttttaaaggttgaacaggatattttgcatggcgaatcgttgcataaaagt
ttgtctgctttttcgttttatccggctaagatgatccagttgattaaggtaggtgaagaa
gtaaaccgaatggattattttttcgagaaaatagctactcaatatactgaggaagtggaa
tataaaaccaataccattagcagtttattggagcctttaattattattttccttggtttg
gtagtaggaataatattaattgcgatgtacctgccaatgttccagatgagcaatagtttt
taa
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