Pedobacter ginsengisoli: CPT03_17860
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Entry
CPT03_17860 CDS
T05145
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CPT03_17860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_2
HHH_6
DUF3391
Motif
Other DBs
NCBI-ProteinID:
ATP58198
UniProt:
A0A2D1U9A3
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All DBs
Position
complement(4312313..4314637)
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AA seq
774 aa
AA seq
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MSNHSTIIAAELAVAEKQVIATIELLDEGATVPFISRYRKEMTGSLDEVQVAAIRDRFQQ
LRELDKRREAILKALAALDKLTPELEAKINAAANIATIEDIYLPYKPKRKTRASEARKKG
LEPLAIAILEQGKEDPELEAGKFLSDELGVSSTEEALAGARDIIAEIVNENIDARISMRK
YFQNNATFKSTLVKGKEEAGIKYKDYFDWKEPLKSAPSHRVLAMRRGENEDILKLEALPE
EDGAIQILEKQFVKSNNGNSAQVKLAIQDSYKRLLGPAMETEIRNLSKEKADEEAIRVFA
ENARQLLLAAPLGQKNVLAIDPGFRTGCKVVCLDKQGKLLENTAIYPHNGQRGALEGAET
IKKLCAKHHIEAIAIGNGTAGRETEVFIRGLAIADVVVVMVSENGASIYSASEVAREEFP
TQDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQASLDDTVMSCVNAV
GVELNTASKQVLAYVSGLGPQLAQNIVSYRNEHGAFKNRESLKKVPRLGDKAFEQAAGFL
RIRDAEHVLDTSGVHPERYALVNKMARDLSCSVAQLMKDAELRKQIKLQQYVSDEIGLPT
LNDIMSELAKPGRDPREQFEVFSFTEGVNGIDDLKIGMKLPGIVTNITNFGAFVDIGVHQ
DGLVHTSQLSNKFVSNANDIVKVHQKVEVTVVEVDVARKRISLSMKTEASAPKPQPKKTD
QKHNNFKKQVNPSKPDQHRKPAKPQNNNGGTKKEKPLPEGDLQLKLEALKNMFK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcactctacaataatcgctgctgaactcgcagtagcggaaaagcaggttatc
gctactattgaattactggatgaaggcgcaactgttccctttatttcgcgttaccgcaag
gagatgacagggagtttggacgaggttcaggttgcggccatccgcgaccggtttcagcag
ctccgcgagcttgataagcgtagagaagcaattctaaaagcacttgctgcacttgataaa
ttaactccggagcttgaggctaagataaatgcagcagcaaacattgccaccattgaggat
atttaccttccatataagcccaaacgtaaaaccagagcatccgaagctcgtaagaaaggc
ctggagcctcttgctattgccatacttgaacaggggaaagaagatcctgagctagaggct
ggcaaattccttagtgatgaacttggcgtatcttcaacagaagaagcattggccggagca
cgagatattattgcagaaattgtaaatgagaacattgatgccagaatatcaatgagaaaa
tactttcaaaataatgctacgtttaaatctactttggttaagggtaaggaagaagccggg
attaaatacaaggattattttgattggaaggaacctcttaagtcagccccgtctcatagg
gttcttgcgatgcgtagaggtgaaaatgaagatatcttaaagcttgaagcattgccagaa
gaagatggtgcaatccagattctggaaaaacaatttgtaaaaagcaataatggcaattct
gcacaggttaaactggctatacaagacagttataaacggttgcttgggccggcaatggaa
actgagattcgcaatctttcaaaagaaaaggcagatgaagaagcaatacgtgtatttgca
gagaatgcaagacaattgctgcttgctgcaccacttgggcaaaagaatgtactggcaatt
gatccgggattccgtaccggttgcaaagttgtttgcctggataaacaaggaaaattacta
gaaaatactgccatatatccgcacaacggtcaaagaggtgcattagagggggctgaaact
attaaaaaactatgcgctaaacatcatattgaagccatagctataggaaatggaacagca
ggaagggagactgaagtatttatccgcggattagctattgcagatgttgtggtggtgatg
gtaagtgaaaatggagcatctatctattcggcttctgaggttgcaagagaagagttccca
actcaggatattactgtaagaggagctgtttcaattggccgccgtttgatggatccatta
gcagaactagttaaaatagatcctaagtcaattggggtagggcaataccagcatgatgtt
gatcagaataagctacaggcctctttggatgatactgtaatgagttgtgtgaatgcagta
ggggtagagctaaatacggcgtctaaacaagttcttgcatacgtatccggccttgggccg
caacttgcacaaaacattgtaagctatcgtaatgagcatggtgcatttaaaaacagggaa
agccttaaaaaggtacctcgtttaggcgataaggcatttgaacaggctgccggattttta
agaattagagatgctgagcatgtgttggataccagtggtgttcaccctgagcgttatgct
ttggttaataaaatggccagagatctaagctgtagtgttgctcaacttatgaaagatgca
gagttaagaaagcagatcaaacttcagcaatatgtaagtgacgaaataggtttgccaact
ttaaatgacattatgagtgagcttgcgaaaccaggaagggacccacgtgagcaatttgaa
gtatttagttttaccgaaggtgttaatggaattgatgatctgaagattggaatgaaacta
ccaggtattgtaactaatattaccaatttcggagcttttgtggatataggtgttcatcag
gatggcctggtgcataccagtcagctttcaaataagtttgtatccaatgctaatgatatt
gttaaggtgcatcagaaagtagaagttactgtagttgaggttgatgttgcaagaaaaagg
atttctttatcaatgaaaacagaagcatcagctcctaaacctcagcctaaaaagactgat
caaaagcataataattttaaaaaacaagtaaatcccagtaagccggatcagcatagaaaa
cctgcaaagcctcagaataacaacggcggcaccaaaaaggaaaaaccgctgccggaagga
gatttacaattgaaacttgaagcattgaaaaatatgtttaaataa
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