Pedobacter ginsengisoli: CPT03_18955
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Entry
CPT03_18955 CDS
T05145
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs03030
DNA replication
pgs03430
Mismatch repair
pgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPT03_18955
03430 Mismatch repair
CPT03_18955
03440 Homologous recombination
CPT03_18955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgs03032
]
CPT03_18955
03400 DNA repair and recombination proteins [BR:
pgs03400
]
CPT03_18955
Enzymes [BR:
pgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPT03_18955
DNA replication proteins [BR:
pgs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPT03_18955
DNA repair and recombination proteins [BR:
pgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPT03_18955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ATP58391
UniProt:
A0A2D1UA03
LinkDB
All DBs
Position
4533831..4534979
Genome browser
AA seq
382 aa
AA seq
DB search
MQFKNIIGQESIKQQLIQTVAENRISHAQLFLSSEGSGALPMAIAYAQYINCLDKQADDS
CGECSSCRKYERYIHPDLHFSYPFFASKDVRIAVDVLDEWRSMMLADPYFDMDIWRSKLS
AENKQANINIAECHDIIKKLSYKAFEAQTKVLIMWLPEYLDKEGNSLLKIIEEPPQNTLF
ILVANNQEQILSTLLSRTQIVKIPKLPHATVESYLMDEYGLSENQATEYSFLADGNLIEA
KQLVANTQNENADKFAEWLRMGYGNRVLDLTNFVDQIAGWGRENQKNFLKYGISFLRECS
LLLSGAEDLVKLPVSAMETAKKLSTHVLNLNMADAIISELEKAHYHIERNANPKILFLDV
SLQLVKIIKFKTLPKGTQYIYS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaagaatatcataggtcaggaaagcataaaacagcaattgatacaaacagtt
gctgagaataggataagtcatgcgcagttgtttctttcatcagaaggaagcggagcctta
cctatggcaattgcctatgcccaatacattaactgccttgataaacaggctgatgatagc
tgcggagaatgctcttcgtgcagaaagtacgaaagatatattcatcctgatttgcatttt
tcttatccgttttttgcctcaaaagatgtaagaatagcggtagatgttttagacgaatgg
cgaagtatgatgcttgccgatccttattttgatatggatatctggcgttctaaattgagc
gctgagaataaacaggcaaatattaacatcgcagagtgtcatgatatcatcaaaaaatta
agttataaagcttttgaagcacagacaaaggttttgattatgtggttgcccgaatatctg
gataaagaaggcaattcattgttaaagattattgaagaaccacctcaaaataccctgttt
attttagtggcaaacaatcaggagcaaattctttcaacccttttgtcgcgtacgcagatt
gttaaaataccgaaactgcctcatgccactgttgaaagctatttgatggatgaatatggc
ctgtcggaaaatcaggctaccgaatacagttttcttgcagatggaaatttaattgaggcc
aagcagttggtggccaatacacaaaatgaaaatgccgacaagtttgccgaatggttaaga
atgggttatggcaaccgggttttggatttaaccaattttgtagatcagattgccggatgg
ggaagggaaaaccaaaagaactttttaaaatacgggattagttttttaagagaatgcagc
ctgctgttaagcggagctgaggacctggttaaactgccggtttcggctatggaaacagca
aaaaagctatcaacccacgtgcttaatcttaacatggccgatgctattatttcggaactg
gaaaaggcacattatcacatcgagagaaatgcgaatcccaaaattctgtttttagatgta
tctttacagctagttaaaataataaagtttaaaacgctcccgaaagggactcaatatata
tatagttaa
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