Pedobacter ginsengisoli: CPT03_19010
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Entry
CPT03_19010 CDS
T05145
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00450
Selenocompound metabolism
pgs00970
Aminoacyl-tRNA biosynthesis
pgs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CPT03_19010
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CPT03_19010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgs01007
]
CPT03_19010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgs03016
]
CPT03_19010
Enzymes [BR:
pgs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
CPT03_19010
Amino acid related enzymes [BR:
pgs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CPT03_19010
Transfer RNA biogenesis [BR:
pgs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CPT03_19010
Prokaryotic type
Other AARSs
CPT03_19010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
DZR
Zn_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
ATP58402
UniProt:
A0A2D1U9X1
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All DBs
Position
4549791..4551899
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AA seq
702 aa
AA seq
DB search
MDNSKIKRYTVTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVP
ITLKAKKEGTTPQAIVDKYHKIIGDSFKELGVSFDIYHRTSSLTHHQTASDFFETLYNKG
VFTEEVTEQYYDEKAQTFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTL
SGEKPVRKETKNWFLPLDQYEDQLRTYIESHKEWRPNVYGQCQSWLNAGLQPRAMTRDLD
WGIKVPIKGAEGKVLYVWFDAPIGYISATKELFEYARLGIWNPKAEEYYINQNEVENGNW
EQYWKDDETKLVHFIGKDNIVFHCIIFPAMLMAHGDYTLADNVPANEFLNLEGQKISTSK
NWAVWLDEYLIEFKDKQDVLRYVLTATAPETKDNDFTWKDFQARNNNELVAILGNFINRV
VVLTHKYFGGKVPTCMTITPEDQQVIDDLAAYPAKISASIENYRFREALAEVMNVARLGN
KYLAETGPWKVIKTDEDRVRTILNISLQIAATLEILIEPFLPFTADKLQKMLNYGGHLWE
DAGKMGLLKRGHELNEPVLLFDKIEDETVQAQIDKLKKSKADNVAATATVEPAKENIQFE
QFTAIDIRVATIIAAEKVEKTKKLLKLTLDTGIDQRTVVSGIAEYYKPEEIIGQQVSLVV
NLAPREIKGILSQGMILMSEDSDGKLAFVSPVQNHSNGSVIR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttggataacagtaaaataaagagatataccgttacggctgcgctgccctatacaaacgga
cctgtacatattgggcatttagccggtgtttacctacctgctgatacctatgtgaggtat
ttgcgctctaataaaagagatgtaaagtttatttgcggatctgacgaaaatggggttccc
attacgctaaaggctaaaaaggaaggcactacgcctcaggctatagtagataaataccat
aaaattattggcgattcatttaaagaactgggtgtttctttcgatatttatcaccgcaca
tcatcattaacgcaccatcaaactgcttcagatttctttgaaaccctttataataaaggt
gtttttactgaggaagttaccgaacagtattatgatgaaaaagcacaaacctttttggcc
gacagatacattaccggtacctgccctaagtgcggaaatgaaaatgcttatggcgatcag
tgtgaaaattgcggaagtactttaaatgcaactgatcttatcaaccctaaatctacctta
tctggagagaaacccgtaaggaaagaaacaaaaaactggtttttgccccttgatcaatat
gaggatcaattgagaacttatattgaaagccataaagaatggaggccaaatgtatacgga
caatgccaaagctggttaaacgcaggcttacagccccgtgcgatgaccagagacttggat
tggggtattaaagttcctattaaaggtgccgaaggtaaagttttgtatgtgtggtttgat
gctcctattggttacatctcggccactaaagagttatttgaatacgctcgtttgggtatt
tggaatcctaaagccgaggaatattacattaaccaaaatgaggtagaaaatggcaactgg
gagcaatactggaaagatgatgaaaccaagcttgttcactttataggtaaagataatatt
gtatttcactgtattatttttccggccatgttaatggctcacggcgattatacattggct
gataatgtgcctgcaaacgagtttctgaatctggaaggtcaaaaaatatcgacttctaaa
aactgggcggtttggcttgatgaatacctgattgagtttaaagacaaacaggatgtttta
cgctatgttttaacagctacagctcccgaaacaaaggataacgactttacctggaaagat
tttcaggcaagaaataacaatgaactggttgccattttaggtaatttcattaacagagtg
gtagttttaacgcataaatattttggaggtaaggttccaacatgcatgaccatcacacca
gaagatcagcaggtgattgatgacctggctgcataccctgcaaaaataagtgcttcgata
gaaaattatcgtttcagagaggctttggcagaggtaatgaatgttgctcgcttaggtaat
aaatacctggcagaaacagggccctggaaggttataaaaacagatgaagatcgtgtacgc
accatcctaaacatcagtttgcaaattgctgccaccctagaaatactgattgaacctttt
ttaccttttactgccgataaattgcagaaaatgcttaattacggtggccatttatgggag
gatgctggtaaaatgggcttattgaaacgcggccacgagcttaacgagcctgtgttgttg
tttgataagatcgaagacgaaacggtacaagctcaaatagataaacttaaaaaaagcaaa
gccgataatgttgctgcaacagcaactgtagagcctgctaaagagaacattcaatttgaa
caatttacggcaattgatatcagggtagctacaattattgcagcagaaaaggttgagaag
accaagaagctgttaaagctaacgcttgacactggtattgatcaacgaactgttgtttcg
ggcattgccgagtattataagccagaagaaataataggacagcaagttagtttggttgta
aacctggctccacgcgaaattaaaggaattctttctcagggaatgatcctgatgtctgaa
gattcggatggcaagttagctttcgtatcaccagtacaaaatcatagcaacggtagtgtg
attcgataa
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